RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 POLR3DP05423 398 aaPredicted RBP22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 MX1P20591 662 aa22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 FBXO46Q6PJ61 603 aaPredicted RBP22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 ZBTB21Q9ULJ3 1066 aa22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 HPS5Q9UPZ3 1129 aa22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 SLC45A1Q9Y2W3 748 aa22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 CENPFP49454 3210 aa22.3■■□□□ 1.16
SHKBP1-202ENST00000593764 CYP2C8P10632 490 aa22.29■■□□□ 1.16
SHKBP1-202ENST00000593764 SHMT1P34896 483 aa22.29■■□□□ 1.16
SHKBP1-202ENST00000593764 SMC5Q8IY18 1101 aa22.29■■□□□ 1.16
SHKBP1-202ENST00000593764 ATP8A2Q9NTI2 1148 aa22.29■■□□□ 1.16
SHKBP1-202ENST00000593764 CPA4Q9UI42 421 aa22.29■■□□□ 1.16
SHKBP1-202ENST00000593764 CYP2D6P10635 497 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 HMGCS2P54868 508 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 SH3D19Q5HYK7 790 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 TREML2Q5T2D2 321 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 PROCA1Q8NCQ7 364 aaPredicted RBP22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 OSBP2Q969R2 916 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 PARK7Q99497 189 aaKnown RBP22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 RWDD1Q9H446 243 aaPredicted RBP22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 EFCC1Q9HA90 598 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 AS3MTQ9HBK9 375 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 STAP2Q9UGK3 403 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 AGTPBP1Q9UPW5 1226 aa22.28■■□□□ 1.16
SHKBP1-202ENST00000593764 RNF113AO15541 343 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-202ENST00000593764 GH2P01242 217 aa22.27■■□□□ 1.16
SHKBP1-202ENST00000593764 LACTBP83111 547 aaPredicted RBP22.27■■□□□ 1.16
SHKBP1-202ENST00000593764 CERKLQ49MI3 558 aaPredicted RBP22.27■■□□□ 1.16
SHKBP1-202ENST00000593764 NAV1Q8NEY1 1877 aa22.27■■□□□ 1.16
SHKBP1-202ENST00000593764 STRBPQ96SI9 672 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-202ENST00000593764 SMIM22K7EJ46 135 aa22.26■■□□□ 1.15
SHKBP1-202ENST00000593764 BACE1P56817 501 aa22.26■■□□□ 1.15
SHKBP1-202ENST00000593764 APPBP2Q92624 585 aa22.26■■□□□ 1.15
SHKBP1-202ENST00000593764 ARHGAP39Q9C0H5 1083 aa22.26■■□□□ 1.15
SHKBP1-202ENST00000593764 ZBTB47Q9UFB7 747 aaPredicted RBP22.26■■□□□ 1.15
SHKBP1-202ENST00000593764 PTPN22Q9Y2R2 807 aa22.26■■□□□ 1.15
SHKBP1-202ENST00000593764 SLC4A4Q9Y6R1 1079 aa22.26■■□□□ 1.15
SHKBP1-202ENST00000593764 ZFYP08048 801 aaPredicted RBP22.25■■□□□ 1.15
SHKBP1-202ENST00000593764 BCRP11274 1271 aa22.25■■□□□ 1.15
SHKBP1-202ENST00000593764 CTGFP29279 349 aa22.25■■□□□ 1.15
SHKBP1-202ENST00000593764 PDE1AP54750 535 aa22.25■■□□□ 1.15
SHKBP1-202ENST00000593764 MTMR2Q13614 643 aa22.25■■□□□ 1.15
SHKBP1-202ENST00000593764 CYP2D7A0A087X1C5 515 aa22.24■■□□□ 1.15
SHKBP1-202ENST00000593764 USP17L12C9JPN9 530 aa22.24■■□□□ 1.15
SHKBP1-202ENST00000593764 USP17L21D6R901 530 aa22.24■■□□□ 1.15
SHKBP1-202ENST00000593764 C12orf60Q5U649 245 aa22.24■■□□□ 1.15
SHKBP1-202ENST00000593764 SLC44A5Q8NCS7 719 aa22.24■■□□□ 1.15
SHKBP1-202ENST00000593764 DYNLL2Q96FJ2 89 aa22.24■■□□□ 1.15
SHKBP1-202ENST00000593764 LNPKQ9C0E8 428 aa22.24■■□□□ 1.15
SHKBP1-202ENST00000593764 BAZ2AQ9UIF9 1905 aaKnown RBP22.23■■□□□ 1.15
SHKBP1-202ENST00000593764 GSG1L2A8MUP6 293 aa22.23■■□□□ 1.15
SHKBP1-202ENST00000593764 C19orf81C9J6K1 198 aa22.23■■□□□ 1.15
SHKBP1-202ENST00000593764 USP17L10C9JJH3 530 aa22.23■■□□□ 1.15
SHKBP1-202ENST00000593764 GUCY1A2P33402 732 aa22.23■■□□□ 1.15
SHKBP1-202ENST00000593764 ABCB5Q2M3G0 1257 aa22.23■■□□□ 1.15
SHKBP1-202ENST00000593764 CTR9Q6PD62 1173 aa22.23■■□□□ 1.15
SHKBP1-202ENST00000593764 LOC285556D6RIA3 1793 aa22.22■■□□□ 1.15
SHKBP1-202ENST00000593764 M0R2C6 588 aa22.22■■□□□ 1.15
SHKBP1-202ENST00000593764 ARHGEF6Q15052 776 aa22.22■■□□□ 1.15
SHKBP1-202ENST00000593764 B4GALNT3Q6L9W6 998 aa22.22■■□□□ 1.15
SHKBP1-202ENST00000593764 EMILIN3Q9NT22 766 aa22.22■■□□□ 1.15
SHKBP1-202ENST00000593764 TAOK2Q9UL54 1235 aa22.22■■□□□ 1.15
SHKBP1-202ENST00000593764 ZSWIM8A7E2V4 1837 aa22.22■■□□□ 1.15
SHKBP1-202ENST00000593764 GPAA1O43292 621 aa22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 NUCB1Q02818 461 aa22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 KIF22Q14807 665 aa22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 RAB3GAP1Q15042 981 aa22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 TRIM47Q96LD4 638 aa22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 SEC62Q99442 399 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 FSD1Q9BTV5 496 aa22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 SWAP70Q9UH65 585 aa22.21■■□□□ 1.15
SHKBP1-202ENST00000593764 HOXA7P31268 230 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 PSMC4P43686 418 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 RGS19P49795 217 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 ZMYM1Q5SVZ6 1142 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 GIMAP6Q6P9H5 292 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 CHD1LQ86WJ1 897 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 ACER1Q8TDN7 264 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 DDRGK1Q96HY6 314 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 ASCC2Q9H1I8 757 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 CABP5Q9NP86 173 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 TMOD4Q9NZQ9 345 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 PNMA3Q9UL41 463 aa22.2■■□□□ 1.14
SHKBP1-202ENST00000593764 ECM2O94769 699 aaPredicted RBP22.19■■□□□ 1.14
SHKBP1-202ENST00000593764 GNRH1P01148 92 aa22.19■■□□□ 1.14
SHKBP1-202ENST00000593764 CDK8P49336 464 aa22.19■■□□□ 1.14
SHKBP1-202ENST00000593764 PABPC4Q13310 644 aaKnown RBP eCLIP22.19■■□□□ 1.141e-9■■■■□ 22.8
SHKBP1-202ENST00000593764 SEPT2Q15019 361 aa22.19■■□□□ 1.14
SHKBP1-202ENST00000593764 C16orf86Q6ZW13 317 aa22.19■■□□□ 1.14
SHKBP1-202ENST00000593764 SMCR8Q8TEV9 937 aaPredicted RBP22.19■■□□□ 1.14
SHKBP1-202ENST00000593764 SBK1Q52WX2 424 aa22.18■■□□□ 1.14
SHKBP1-202ENST00000593764 USP17L2Q6R6M4 530 aa22.18■■□□□ 1.14
SHKBP1-202ENST00000593764 EVI5LQ96CN4 794 aa22.18■■□□□ 1.14
SHKBP1-202ENST00000593764 KIAA1683Q9H0B3 1180 aa22.18■■□□□ 1.14
SHKBP1-202ENST00000593764 EPB41L4AQ9HCS5 686 aaPredicted RBP22.18■■□□□ 1.14
SHKBP1-202ENST00000593764 PTCH2Q9Y6C5 1203 aa22.18■■□□□ 1.14
SHKBP1-202ENST00000593764 GNAT2P19087 354 aa22.17■■□□□ 1.14
SHKBP1-202ENST00000593764 OSBPP22059 807 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms