RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 TMEM265A0A087WTH1 108 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 USP17L5A8MUK1 530 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 C19orf81C9J6K1 198 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 LDHCP07864 332 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 GSTO1P78417 241 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 PDE3AQ14432 1141 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 SH3BP5LQ7L8J4 393 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 ATG9AQ7Z3C6 839 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 TRIB2Q92519 343 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
SMAD4-215ENST00000592911 DCBLD2Q96PD2 775 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 USP44Q9H0E7 712 aa10.8□□□□□ -0.68
SMAD4-215ENST00000592911 ASCC2Q9H1I8 757 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-215ENST00000592911 DHX36Q9H2U1 1008 aaKnown RBP10.8□□□□□ -0.68
SMAD4-215ENST00000592911 DDTLA6NHG4 134 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-215ENST00000592911 ASNSP08243 561 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 ZKSCAN1P17029 563 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-215ENST00000592911 CAP2P40123 477 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 RGS2P41220 211 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 IRX3P78415 501 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-215ENST00000592911 SPP2Q13103 211 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 TREML2Q5T2D2 321 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 Q7L0L9 218 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 ZFPM1Q8IX07 1006 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 GPRC5AQ8NFJ5 357 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 LBHD1Q9BQE6 289 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-215ENST00000592911 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMAD4-215ENST00000592911 RLFQ13129 1914 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 LTBP2Q14767 1821 aa10.79□□□□□ -0.68
SMAD4-215ENST00000592911 GLRX3O76003 335 aaKnown RBP10.78□□□□□ -0.68
SMAD4-215ENST00000592911 BTDP43251 543 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 ZNF697Q5TEC3 545 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 CCDC102BQ68D86 513 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 METTL16Q86W50 562 aaKnown RBP10.78□□□□□ -0.68
SMAD4-215ENST00000592911 USP6NLQ92738 828 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 GUCD1Q96NT3 240 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 APBA2Q99767 749 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 COPRSQ9NQ92 184 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 TMOD4Q9NZQ9 345 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 AKAP2Q9Y2D5 859 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 DNAH12Q6ZR08 3092 aa10.78□□□□□ -0.68
SMAD4-215ENST00000592911 PLCG2P16885 1265 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 SYN1P17600 705 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 HMGCS2P54868 508 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 BACE1P56817 501 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 RHBDL3P58872 404 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 MVPQ14764 893 aaKnown RBP10.77□□□□□ -0.69
SMAD4-215ENST00000592911 LHX8Q68G74 356 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 ERICH6Q7L0X2 663 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 MRPL50Q8N5N7 158 aaKnown RBP10.77□□□□□ -0.69
SMAD4-215ENST00000592911 KLHDC4Q8TBB5 520 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 DDX4Q9NQI0 724 aaKnown RBP10.77□□□□□ -0.69
SMAD4-215ENST00000592911 PI4KBQ9UBF8 816 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 PRKAG2Q9UGJ0 569 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 MYO9BQ13459 2157 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 ZNF236Q9UL36 1845 aa10.77□□□□□ -0.69
SMAD4-215ENST00000592911 SPTBN5Q9NRC6 3674 aaKnown RBP10.77□□□□□ -0.69
SMAD4-215ENST00000592911 CDK5RAP2Q96SN8 1893 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 DNM1LO00429 736 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 HOXC6P09630 235 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 PHKA1P46020 1223 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 HERVK_113P62684 666 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 CCNA1P78396 465 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 SMAD3P84022 425 aaKnown RBP10.76□□□□□ -0.69
SMAD4-215ENST00000592911 RASGRF1Q13972 1273 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 ALDH1L2Q3SY69 923 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 MORN1Q5T089 497 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 CERS3Q8IU89 383 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 BBXQ8WY36 941 aaPredicted RBP10.76□□□□□ -0.69
SMAD4-215ENST00000592911 PRDM6Q9NQX0 595 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 PRUNE2Q8WUY3 3088 aa10.76□□□□□ -0.69
SMAD4-215ENST00000592911 SIPA1L1O43166 1804 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 CYP2B6P20813 491 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 ERVK-24P63145 666 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 CACNB2Q08289 660 aaPredicted RBP10.75□□□□□ -0.69
SMAD4-215ENST00000592911 LRRC26Q2I0M4 334 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 C1orf53Q5VUE5 145 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 MFSD14CQ5VZR4 134 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 TMED8Q6PL24 325 aaPredicted RBP10.75□□□□□ -0.69
SMAD4-215ENST00000592911 ATF7IPQ6VMQ6 1270 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 LBX2Q6XYB7 198 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 FOXP4Q8IVH2 680 aaPredicted RBP10.75□□□□□ -0.69
SMAD4-215ENST00000592911 CCAR1Q8IX12 1150 aaKnown RBP10.75□□□□□ -0.69
SMAD4-215ENST00000592911 EFCAB3Q8N7B9 438 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 LPAR1Q92633 364 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 ABCF2Q9UG63 623 aa10.75□□□□□ -0.69
SMAD4-215ENST00000592911 USP17L10C9JJH3 530 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 UBTFL1P0CB47 393 aaPredicted RBP10.74□□□□□ -0.69
SMAD4-215ENST00000592911 MECOMQ03112 1051 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 TRIM32Q13049 653 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 MAP2K5Q13163 448 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 PICALMQ13492 652 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 GPR142Q7Z601 462 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 PLEKHH3Q7Z736 793 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 C12orf42Q96LP6 360 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 MRS2Q9HD23 443 aa10.74□□□□□ -0.69
SMAD4-215ENST00000592911 RABGAP1Q9Y3P9 1069 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms