RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 DNAJC2Q99543 621 aaKnown RBP16.43■□□□□ 0.22
CAPNS1-213ENST00000592354 RNF208Q9H0X6 261 aa16.43■□□□□ 0.22
CAPNS1-213ENST00000592354 UNC93B1Q9H1C4 597 aa16.43■□□□□ 0.22
CAPNS1-213ENST00000592354 TMOD4Q9NZQ9 345 aa16.43■□□□□ 0.22
CAPNS1-213ENST00000592354 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
CAPNS1-213ENST00000592354 MYH8P13535 1937 aa16.43■□□□□ 0.22
CAPNS1-213ENST00000592354 IGSF3O75054 1194 aa16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 INHAP05111 366 aa16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 BACE1P56817 501 aa16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.225e-11■■□□□ 13.1
CAPNS1-213ENST00000592354 METTL16Q86W50 562 aaKnown RBP16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 FOXP4Q8IVH2 680 aaPredicted RBP16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 SIRT2Q8IXJ6 389 aa16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 COA7Q96BR5 231 aa16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
CAPNS1-213ENST00000592354 PEX10O60683 326 aa16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 HMMRO75330 724 aa16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 GJB1P08034 283 aa16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 GJA8P48165 433 aa16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 GCLCP48506 637 aaPredicted RBP16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
CAPNS1-213ENST00000592354 USP17L10C9JJH3 530 aa16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 GOLIM4O00461 696 aa16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 GH2P01242 217 aa16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 IRF5Q13568 498 aa16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 EDC3Q96F86 508 aaKnown RBP16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 RIOK1Q9BRS2 568 aaKnown RBP16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 SERPINB13Q9UIV8 391 aa16.4■□□□□ 0.22
CAPNS1-213ENST00000592354 BAZ2AQ9UIF9 1905 aaKnown RBP16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 MAGEB6P1A0A0J9YX57 407 aa16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 PDE6AP16499 860 aa16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 EVX2Q03828 476 aa16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 TTF1Q15361 905 aaPredicted RBP16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 CERS3Q8IU89 383 aa16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
CAPNS1-213ENST00000592354 PLCD1P51178 756 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 HERVK_113P62684 666 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 HABP4Q5JVS0 413 aaKnown RBP16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 FEZ1Q99689 392 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 EHD4Q9H223 541 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 MORF4L1Q9UBU8 362 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 ZNF532Q9HCE3 1301 aa16.38■□□□□ 0.21
CAPNS1-213ENST00000592354 C19orf81C9J6K1 198 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 H0YGN5 161 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 HOXA7P31268 230 aaPredicted RBP16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 TATDN1Q6P1N9 297 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 LCORLQ8N3X6 602 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 DEFB118Q96PH6 123 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 PAGR1Q9BTK6 254 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 EMILIN3Q9NT22 766 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 GINM1Q9NU53 330 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
CAPNS1-213ENST00000592354 TCRBV5S4A2TA0A5A2 114 aa16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 FARP2O94887 1054 aaPredicted RBP16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 SHMT1P34896 483 aa16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 SLFNL1Q499Z3 407 aa16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 UBE2Q1Q7Z7E8 422 aa16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 DPF3Q92784 378 aa16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 CRNKL1Q9BZJ0 848 aaKnown RBP16.36■□□□□ 0.21
CAPNS1-213ENST00000592354 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 SGPL1O95470 568 aa16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 TRIM32Q13049 653 aa16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 ABCB5Q2M3G0 1257 aa16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 CERKLQ49MI3 558 aaPredicted RBP16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 BOLA2Q9H3K6 86 aa16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 PAG1Q9NWQ8 432 aa16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 MCM9Q9NXL9 1143 aa16.35■□□□□ 0.21
CAPNS1-213ENST00000592354 A0A0G2JMZ2 1700 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 FRMPD3Q5JV73 1810 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 HMGCRP04035 888 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 CHGBP05060 677 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 CYP2D6P10635 497 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 GPRC5AQ8NFJ5 357 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 TRIB2Q92519 343 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 PORCNQ9H237 461 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 ARMT1Q9H993 441 aa16.34■□□□□ 0.21
CAPNS1-213ENST00000592354 PAK6Q9NQU5 681 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms