RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FAM109BQ6ICB4 259 aaPredicted RBP21.39■■□□□ 1.01
RETREG3-210ENST00000590541 POTEEQ6S8J3 1075 aa21.39■■□□□ 1.01
RETREG3-210ENST00000590541 SPATA5Q8NB90 893 aa21.39■■□□□ 1.01
RETREG3-210ENST00000590541 PORCNQ9H237 461 aa21.39■■□□□ 1.01
RETREG3-210ENST00000590541 SMC4Q9NTJ3 1288 aa21.39■■□□□ 1.01
RETREG3-210ENST00000590541 TMOD4Q9NZQ9 345 aa21.39■■□□□ 1.01
RETREG3-210ENST00000590541 AKAP2Q9Y2D5 859 aa21.39■■□□□ 1.01
RETREG3-210ENST00000590541 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
RETREG3-210ENST00000590541 SHROOM1Q2M3G4 852 aaPredicted RBP21.38■■□□□ 1.01
RETREG3-210ENST00000590541 GPR142Q7Z601 462 aa21.38■■□□□ 1.01
RETREG3-210ENST00000590541 TEX11Q8IYF3 940 aa21.38■■□□□ 1.01
RETREG3-210ENST00000590541 SH3RF3Q8TEJ3 882 aaPredicted RBP21.38■■□□□ 1.01
RETREG3-210ENST00000590541 DNAJC18Q9H819 358 aa21.38■■□□□ 1.01
RETREG3-210ENST00000590541 PI4KBQ9UBF8 816 aa21.38■■□□□ 1.01
RETREG3-210ENST00000590541 ASNSP08243 561 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 RGS2P41220 211 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 ERVK-9P63128 1117 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 ERVK-24P63145 666 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 CDCA7LQ96GN5 454 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 MEIS3Q99687 375 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 RAI14Q9P0K7 980 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 HDAC5Q9UQL6 1122 aa21.37■■□□□ 1.01
RETREG3-210ENST00000590541 C19orf81C9J6K1 198 aa21.36■■□□□ 1.01
RETREG3-210ENST00000590541 NEUROD6Q96NK8 337 aa21.36■■□□□ 1.01
RETREG3-210ENST00000590541 DHX36Q9H2U1 1008 aaKnown RBP21.36■■□□□ 1.01
RETREG3-210ENST00000590541 USP17L10C9JJH3 530 aa21.35■■□□□ 1.01
RETREG3-210ENST00000590541 ARID4AP29374 1257 aaPredicted RBP21.35■■□□□ 1.01
RETREG3-210ENST00000590541 PLEKHH3Q7Z736 793 aa21.35■■□□□ 1.01
RETREG3-210ENST00000590541 METTL16Q86W50 562 aaKnown RBP21.35■■□□□ 1.01
RETREG3-210ENST00000590541 FAM161BQ96MY7 647 aa21.35■■□□□ 1.01
RETREG3-210ENST00000590541 APBA2Q99767 749 aa21.35■■□□□ 1.01
RETREG3-210ENST00000590541 NOB1Q9ULX3 412 aaKnown RBP21.35■■□□□ 1.01
RETREG3-210ENST00000590541 FRMPD3Q5JV73 1810 aa21.34■■□□□ 1.01
RETREG3-210ENST00000590541 MAST2Q6P0Q8 1798 aa21.34■■□□□ 1.01
RETREG3-210ENST00000590541 GDF11O95390 407 aa21.34■■□□□ 1.01
RETREG3-210ENST00000590541 MCAMP43121 646 aa21.34■■□□□ 1.01
RETREG3-210ENST00000590541 PAGR1Q9BTK6 254 aa21.34■■□□□ 1.01
RETREG3-210ENST00000590541 SRGAP3O43295 1099 aa21.33■■□□□ 1.01
RETREG3-210ENST00000590541 CCAR1Q8IX12 1150 aaKnown RBP21.33■■□□□ 1.01
RETREG3-210ENST00000590541 GTF3C2Q8WUA4 911 aaPredicted RBP21.33■■□□□ 1.01
RETREG3-210ENST00000590541 SENP6Q9GZR1 1112 aaPredicted RBP21.33■■□□□ 1.01
RETREG3-210ENST00000590541 EMILIN3Q9NT22 766 aa21.33■■□□□ 1.01
RETREG3-210ENST00000590541 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.01
RETREG3-210ENST00000590541 ZBTB21Q9ULJ3 1066 aa21.33■■□□□ 1.01
RETREG3-210ENST00000590541 MAP2K5Q13163 448 aa21.32■■□□□ 1
RETREG3-210ENST00000590541 MTX1Q13505 466 aa21.32■■□□□ 1
RETREG3-210ENST00000590541 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
RETREG3-210ENST00000590541 FOXP4Q8IVH2 680 aaPredicted RBP21.32■■□□□ 1
RETREG3-210ENST00000590541 TGFBRAP1Q8WUH2 860 aa21.32■■□□□ 1
RETREG3-210ENST00000590541 GINM1Q9NU53 330 aa21.32■■□□□ 1
RETREG3-210ENST00000590541 FLRT1Q9NZU1 646 aa21.32■■□□□ 1
RETREG3-210ENST00000590541 LRP2BPQ9P2M1 347 aa21.32■■□□□ 1
RETREG3-210ENST00000590541 FLT1P17948 1338 aa21.31■■□□□ 1
RETREG3-210ENST00000590541 CNMDO75829 334 aa21.31■■□□□ 1
RETREG3-210ENST00000590541 GORABQ5T7V8 394 aa21.31■■□□□ 1
RETREG3-210ENST00000590541 MAPKAPK5Q8IW41 473 aa21.31■■□□□ 1
RETREG3-210ENST00000590541 EDC3Q96F86 508 aaKnown RBP21.31■■□□□ 1
RETREG3-210ENST00000590541 LBHD1Q9BQE6 289 aaPredicted RBP21.31■■□□□ 1
RETREG3-210ENST00000590541 API5Q9BZZ5 524 aaKnown RBP21.31■■□□□ 1
RETREG3-210ENST00000590541 PPP4CP60510 307 aa21.3■■□□□ 1
RETREG3-210ENST00000590541 ADGRA1Q86SQ6 560 aa21.3■■□□□ 1
RETREG3-210ENST00000590541 CRACR2BQ8N4Y2 399 aaPredicted RBP21.3■■□□□ 1
RETREG3-210ENST00000590541 NOL10Q9BSC4 688 aaKnown RBP21.3■■□□□ 1
RETREG3-210ENST00000590541 PALD1Q9ULE6 856 aa21.3■■□□□ 1
RETREG3-210ENST00000590541 LAMA2P24043 3122 aaKnown RBP21.3■■□□□ 1
RETREG3-210ENST00000590541 VCANP13611 3396 aa21.29■■□□□ 1
RETREG3-210ENST00000590541 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
RETREG3-210ENST00000590541 BAG3O95817 575 aa21.29■■□□□ 1
RETREG3-210ENST00000590541 ATN1P54259 1190 aaPredicted RBP21.29■■□□□ 1
RETREG3-210ENST00000590541 ZNF697Q5TEC3 545 aa21.29■■□□□ 1
RETREG3-210ENST00000590541 NAA16Q6N069 864 aaPredicted RBP21.29■■□□□ 1
RETREG3-210ENST00000590541 USP17L2Q6R6M4 530 aa21.29■■□□□ 1
RETREG3-210ENST00000590541 DDX20Q9UHI6 824 aaKnown RBP21.29■■□□□ 1
RETREG3-210ENST00000590541 RABGAP1Q9Y3P9 1069 aa21.29■■□□□ 1
RETREG3-210ENST00000590541 NDUFB9Q9Y6M9 179 aa21.29■■□□□ 1
RETREG3-210ENST00000590541 DNAH12Q6ZR08 3092 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 LTBP2Q14767 1821 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 FOCADQ5VW36 1801 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 PLCG2P16885 1265 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 MFSD14CQ5VZR4 134 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 LPAR1Q92633 364 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 C12orf42Q96LP6 360 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 TRIM34Q9BYJ4 488 aa21.28■■□□□ 1
RETREG3-210ENST00000590541 UQCRFS1P1P0C7P4 283 aa21.27■■□□□ 1
RETREG3-210ENST00000590541 CDX2Q99626 313 aaPredicted RBP21.27■■□□□ 1
RETREG3-210ENST00000590541 CWC22Q9HCG8 908 aaKnown RBP21.27■■□□□ 1
RETREG3-210ENST00000590541 EYSQ5T1H1 3165 aa21.27■■□□□ 1
RETREG3-210ENST00000590541 SLC15A5A6NIM6 579 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 DNM1LO00429 736 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 MSCO60682 206 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 GNAI3P08754 354 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 PTPREP23469 700 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 RTP1P59025 263 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 NPLOC4Q8TAT6 608 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 ARHGAP45Q92619 1136 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 SNRKQ9NRH2 765 aa21.26■□□□□ 0.99
RETREG3-210ENST00000590541 SAP30BPQ9UHR5 308 aaKnown RBP21.26■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L15C9J2P7 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L13C9JLJ4 530 aa21.25■□□□□ 0.99
RETREG3-210ENST00000590541 USP17L11C9JVI0 530 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms