RNA–Protein interactions for RNA: ENST00000590211.5

CAPNS1-210, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-210ENST00000590211 SCARA3Q6AZY7 606 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 FERMT3Q86UX7 667 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 JAMLQ86YT9 394 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 DHX37Q8IY37 1157 aaKnown RBP5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 JDP2Q8WYK2 163 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 EMILIN2Q9BXX0 1053 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 FAM126AQ9BYI3 521 aaPredicted RBP5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 SMG9Q9H0W8 520 aaKnown RBP5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 RBSNQ9H1K0 784 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 FRRS1LQ9P0K9 344 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 PRR12Q9ULL5 1215 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 ABCC2Q92887 1545 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 ATP10BO94823 1461 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 PTPRGP23470 1445 aa5.57□□□□□ -1.52
CAPNS1-210ENST00000590211 MEIS3P2A8K0S8 358 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 LCE2BO14633 110 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 FAM153BP0C7A2 387 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 PTPRAP18433 802 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 POU3F3P20264 500 aaPredicted RBP5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 GUCY2CP25092 1073 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 ADH7P40394 386 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 BAG6P46379 1132 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 CDKN1CP49918 316 aaPredicted RBP5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 LRRFIP1Q32MZ4 808 aaKnown RBP5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 FMNL3Q8IVF7 1028 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 ZSCAN1Q8NBB4 408 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 ZSWIM2Q8NEG5 633 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 SIN3AQ96ST3 1273 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 TM9SF2Q99805 663 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 LACRTQ9GZZ8 138 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 HOMER2Q9NSB8 354 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 RRP7BPQ9NSQ0 103 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 PLAAQ9Y263 795 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 STARD13Q9Y3M8 1113 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 RIPOR2Q9Y4F9 1068 aa5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 ZCCHC11Q5TAX3 1644 aaKnown RBP5.56□□□□□ -1.52
CAPNS1-210ENST00000590211 PRR36Q9H6K5 1346 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 PLEKHD1A6NEE1 506 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 GFRA2O00451 464 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 KCNQ2O43526 872 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 ARAFP10398 606 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 TBC1D8BQ0IIM8 1120 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 TM4SF20Q53R12 229 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 ODR4Q5SWX8 454 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 CYB5RLQ6IPT4 315 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 ILDR2Q71H61 639 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 EEPD1Q7L9B9 569 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 TRERF1Q96PN7 1200 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 SPATA9Q9BWV2 254 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 CFDP1Q9UEE9 299 aaPredicted RBP5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 ATP8A1Q9Y2Q0 1164 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 THRAP3Q9Y2W1 955 aaKnown RBP5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 TTC37Q6PGP7 1564 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 SAMD9LQ8IVG5 1584 aa5.55□□□□□ -1.52
CAPNS1-210ENST00000590211 POLR1AO95602 1720 aaPredicted RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 LTBP3Q9NS15 1303 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 DENND4BO75064 1496 aaPredicted RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 LOC102724159A0A0B4J2E5 919 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 CCDC194A0A1B0GVG4 234 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 CDC14CA4D256 554 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 ADCY3O60266 1144 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 HTR3BO95264 441 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 ECEL1O95672 775 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 BMP4P12644 408 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 PWP2Q15269 919 aaKnown RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 ZYXQ15942 572 aaKnown RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 LONRF2Q1L5Z9 754 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 TMEM67Q5HYA8 995 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 MAP1SQ66K74 1059 aaPredicted RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 ELMSAN1Q6PJG2 1045 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 C20orf204Q6ZNR8 217 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 SV2AQ7L0J3 742 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 THNSL2Q86YJ6 484 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 TAB3Q8N5C8 712 aaPredicted RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 GPR161Q8N6U8 529 aaKnown RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 TMEM40Q8WWA1 233 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 NINJ1Q92982 152 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 SOX17Q9H6I2 414 aaPredicted RBP5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 ERCC6L2Q5T890 1561 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 MAST1Q9Y2H9 1570 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 ANKRD30AQ9BXX3 1397 aa5.54□□□□□ -1.52
CAPNS1-210ENST00000590211 KDM5BQ9UGL1 1544 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 A0A087X0B3 334 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 H3BRJ5 948 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 CTSBP07858 339 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 GSTP1P09211 210 aaKnown RBP5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 ACRP10323 421 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 MYCLP1P12525 358 aaPredicted RBP5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 CNGA1P29973 690 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 CDC27P30260 824 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 IKBKEQ14164 716 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 NCAPHQ15003 741 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 LAPTM4AQ15012 233 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 BRDTQ58F21 947 aaPredicted RBP5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 PSAPL1Q6NUJ1 521 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 VHLLQ6RSH7 139 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 UNC5AQ6ZN44 842 aa5.53□□□□□ -1.52
CAPNS1-210ENST00000590211 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms