RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CSADQ9Y600 493 aa12.59□□□□□ -0.39
SDF2-208ENST00000589788 OTOFQ9HC10 1997 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 DOCK2Q92608 1830 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 GOLIM4O00461 696 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 WDHD1O75717 1129 aaPredicted RBP12.58□□□□□ -0.4
SDF2-208ENST00000589788 PTPREP23469 700 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
SDF2-208ENST00000589788 RHBDL3P58872 404 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 SPRYD7Q5W111 196 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 TMED8Q6PL24 325 aaPredicted RBP12.58□□□□□ -0.4
SDF2-208ENST00000589788 MIGA2Q7L4E1 593 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 ZFPM1Q8IX07 1006 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 MAGEB6Q8N7X4 407 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 WRNIP1Q96S55 665 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 ZNF341Q9BYN7 854 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 BOLA2Q9H3K6 86 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 ELP3Q9H9T3 547 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 ECHDC1Q9NTX5 307 aa12.58□□□□□ -0.4
SDF2-208ENST00000589788 AATFQ9NY61 560 aaKnown RBP eCLIP12.58□□□□□ -0.4
SDF2-208ENST00000589788 RFX7Q2KHR2 1363 aa12.57□□□□□ -0.4
SDF2-208ENST00000589788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.57□□□□□ -0.4
SDF2-208ENST00000589788 EXOC6Q8TAG9 804 aa12.57□□□□□ -0.4
SDF2-208ENST00000589788 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
SDF2-208ENST00000589788 WNK4Q96J92 1243 aa12.57□□□□□ -0.4
SDF2-208ENST00000589788 DDX4Q9NQI0 724 aaKnown RBP12.57□□□□□ -0.4
SDF2-208ENST00000589788 PAG1Q9NWQ8 432 aa12.57□□□□□ -0.4
SDF2-208ENST00000589788 ZBTB48P10074 688 aaPredicted RBP12.56□□□□□ -0.4
SDF2-208ENST00000589788 LBX1P52954 281 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 PPP4CP60510 307 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 SREBF2Q12772 1141 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
SDF2-208ENST00000589788 VGLL4Q14135 290 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.56□□□□□ -0.4
SDF2-208ENST00000589788 ADGRA1Q86SQ6 560 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 HAUS7Q99871 368 aa12.56□□□□□ -0.4
SDF2-208ENST00000589788 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.4
SDF2-208ENST00000589788 RWDD1Q9H446 243 aaPredicted RBP12.56□□□□□ -0.4
SDF2-208ENST00000589788 MANSC4A6NHS7 340 aaPredicted RBP12.55□□□□□ -0.4
SDF2-208ENST00000589788 HSPA8P11142 646 aaKnown RBP12.55□□□□□ -0.4
SDF2-208ENST00000589788 MIGA1Q8NAN2 632 aa12.55□□□□□ -0.4
SDF2-208ENST00000589788 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
SDF2-208ENST00000589788 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
SDF2-208ENST00000589788 OPTNQ96CV9 577 aa12.55□□□□□ -0.4
SDF2-208ENST00000589788 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
SDF2-208ENST00000589788 OSBPL5Q9H0X9 879 aaPredicted RBP12.55□□□□□ -0.4
SDF2-208ENST00000589788 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
SDF2-208ENST00000589788 TRPA1O75762 1119 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 PDE6AP16499 860 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
SDF2-208ENST00000589788 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 PRDM10Q9NQV6 1147 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 RNF186Q9NXI6 227 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 SAGE1Q9NXZ1 904 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
SDF2-208ENST00000589788 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 ERC2O15083 957 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 INPP5BP32019 993 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 USP5P45974 858 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 TM4SF4P48230 202 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 INHBEP58166 350 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
SDF2-208ENST00000589788 ERO1BQ86YB8 467 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 MAPKAPK5Q8IW41 473 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 DHX36Q9H2U1 1008 aaKnown RBP12.53□□□□□ -0.4
SDF2-208ENST00000589788 ZNF112Q9UJU3 913 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 SNCAIPQ9Y6H5 919 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 ZNF532Q9HCE3 1301 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 ATRNL1Q5VV63 1379 aa12.53□□□□□ -0.4
SDF2-208ENST00000589788 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
SDF2-208ENST00000589788 MYH7P12883 1935 aa12.52□□□□□ -0.4
SDF2-208ENST00000589788 RCCD1A6NED2 376 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 GJA5P36382 358 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
SDF2-208ENST00000589788 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 OTUD7BQ6GQQ9 843 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 ZSCAN25Q6NSZ9 544 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 TRIM34Q9BYJ4 488 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.41
SDF2-208ENST00000589788 FLT1P17948 1338 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 TTC41PQ6P2S7 1318 aa12.52□□□□□ -0.41
SDF2-208ENST00000589788 LAMB1P07942 1786 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 ALDH1A1P00352 501 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 MX1P20591 662 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 GTF2A2P52657 109 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 PROX2Q3B8N5 592 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 NOL9Q5SY16 702 aaKnown RBP12.51□□□□□ -0.41
SDF2-208ENST00000589788 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
SDF2-208ENST00000589788 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 CRNKL1Q9BZJ0 848 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms