RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 ARPP21Q9UBL0 812 aaPredicted RBP19.7■□□□□ 0.74
DNMT1-221ENST00000589538 SWAP70Q9UH65 585 aa19.7■□□□□ 0.74
DNMT1-221ENST00000589538 BAZ2AQ9UIF9 1905 aaKnown RBP19.7■□□□□ 0.74
DNMT1-221ENST00000589538 PTPRFP10586 1907 aa19.69■□□□□ 0.74
DNMT1-221ENST00000589538 TRIM75PA6NK02 468 aa19.69■□□□□ 0.74
DNMT1-221ENST00000589538 GPAA1O43292 621 aa19.69■□□□□ 0.74
DNMT1-221ENST00000589538 RRP1BQ14684 758 aaKnown RBP19.69■□□□□ 0.74
DNMT1-221ENST00000589538 ZNF296Q8WUU4 475 aaPredicted RBP19.69■□□□□ 0.74
DNMT1-221ENST00000589538 CABP5Q9NP86 173 aa19.69■□□□□ 0.74
DNMT1-221ENST00000589538 ZBTB21Q9ULJ3 1066 aa19.69■□□□□ 0.74
DNMT1-221ENST00000589538 SLC45A1Q9Y2W3 748 aa19.69■□□□□ 0.74
DNMT1-221ENST00000589538 TRIM6-TRIM34B2RNG4 842 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 USP17L12C9JPN9 530 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 USP17L21D6R901 530 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 PDHXO00330 501 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 SHMT1P34896 483 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 SPP2Q13103 211 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 C12orf60Q5U649 245 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 PROCA1Q8NCQ7 364 aaPredicted RBP19.68■□□□□ 0.74
DNMT1-221ENST00000589538 NACAP1Q9BZK3 213 aa19.68■□□□□ 0.74
DNMT1-221ENST00000589538 GSG1L2A8MUP6 293 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 GDF11O95390 407 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 MOGSQ13724 837 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 ABCB5Q2M3G0 1257 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 SBK1Q52WX2 424 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 CTR9Q6PD62 1173 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 GADL1Q6ZQY3 521 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 CTU1Q7Z7A3 348 aaKnown RBP19.67■□□□□ 0.74
DNMT1-221ENST00000589538 PARK7Q99497 189 aaKnown RBP19.67■□□□□ 0.74
DNMT1-221ENST00000589538 R3HDMLQ9H3Y0 253 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 HELLSQ9NRZ9 838 aa19.67■□□□□ 0.74
DNMT1-221ENST00000589538 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.67■□□□□ 0.74
DNMT1-221ENST00000589538 MYH8P13535 1937 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 C19orf81C9J6K1 198 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 PATL2C9JE40 543 aaKnown RBP19.66■□□□□ 0.74
DNMT1-221ENST00000589538 M0R2C6 588 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 TLR2O60603 784 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 GH2P01242 217 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 APPP05067 770 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 PABPC4Q13310 644 aaKnown RBP eCLIP19.66■□□□□ 0.74
DNMT1-221ENST00000589538 SH3D19Q5HYK7 790 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 RILPL2Q969X0 211 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 ERO1AQ96HE7 468 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 AGTPBP1Q9UPW5 1226 aa19.66■□□□□ 0.74
DNMT1-221ENST00000589538 USP17L10C9JJH3 530 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 CYP2D6P10635 497 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 SP3Q02447 781 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 ARHGEF6Q15052 776 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 PKN2Q16513 984 aaKnown RBP19.65■□□□□ 0.74
DNMT1-221ENST00000589538 GPAT2Q6NUI2 795 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 CCDC84Q86UT8 332 aaPredicted RBP19.65■□□□□ 0.74
DNMT1-221ENST00000589538 CCDC17Q96LX7 622 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 PNMA3Q9UL41 463 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 LOC285556D6RIA3 1793 aa19.65■□□□□ 0.74
DNMT1-221ENST00000589538 TDO2P48775 406 aa19.64■□□□□ 0.73
DNMT1-221ENST00000589538 BACE1P56817 501 aa19.64■□□□□ 0.73
DNMT1-221ENST00000589538 DGKZQ13574 1117 aa19.64■□□□□ 0.73
DNMT1-221ENST00000589538 C16orf86Q6ZW13 317 aa19.64■□□□□ 0.73
DNMT1-221ENST00000589538 SEC62Q99442 399 aaKnown RBP19.64■□□□□ 0.73
DNMT1-221ENST00000589538 ZNF287Q9HBT7 754 aa19.64■□□□□ 0.73
DNMT1-221ENST00000589538 TMOD4Q9NZQ9 345 aa19.64■□□□□ 0.73
DNMT1-221ENST00000589538 HIP1O00291 1037 aa19.63■□□□□ 0.73
DNMT1-221ENST00000589538 CDK8P49336 464 aa19.63■□□□□ 0.73
DNMT1-221ENST00000589538 HMGCS2P54868 508 aa19.63■□□□□ 0.73
DNMT1-221ENST00000589538 JAG1P78504 1218 aa19.63■□□□□ 0.73
DNMT1-221ENST00000589538 RAB3GAP1Q15042 981 aa19.63■□□□□ 0.73
DNMT1-221ENST00000589538 MCMDC2Q4G0Z9 681 aa19.63■□□□□ 0.73
DNMT1-221ENST00000589538 MFAP1P55081 439 aaKnown RBP19.62■□□□□ 0.73
DNMT1-221ENST00000589538 MTMR2Q13614 643 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 KIF22Q14807 665 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 USP17L2Q6R6M4 530 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 TMEM179Q6ZVK1 233 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 IFNL3Q8IZI9 196 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 DYNLL2Q96FJ2 89 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 MCOLN1Q9GZU1 580 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 NAPBQ9H115 298 aa19.62■□□□□ 0.73
DNMT1-221ENST00000589538 ROBO3Q96MS0 1386 aa19.61■□□□□ 0.73
DNMT1-221ENST00000589538 MPHOSPH10O00566 681 aaKnown RBP19.61■□□□□ 0.73
DNMT1-221ENST00000589538 NEFLP07196 543 aa19.61■□□□□ 0.73
DNMT1-221ENST00000589538 USP14P54578 494 aa19.61■□□□□ 0.73
DNMT1-221ENST00000589538 SLC44A5Q8NCS7 719 aa19.61■□□□□ 0.73
DNMT1-221ENST00000589538 FEZ1Q99689 392 aa19.61■□□□□ 0.73
DNMT1-221ENST00000589538 EPB41L4AQ9HCS5 686 aaPredicted RBP19.61■□□□□ 0.73
DNMT1-221ENST00000589538 CYP2D7A0A087X1C5 515 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 MINDY4BA8MYZ0 360 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
DNMT1-221ENST00000589538 SLC3A2P08195 630 aaKnown RBP19.6■□□□□ 0.73
DNMT1-221ENST00000589538 SDSP20132 328 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 OSBPP22059 807 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 PDE4AP27815 886 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 EVX2Q03828 476 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 SHROOM1Q2M3G4 852 aaPredicted RBP19.6■□□□□ 0.73
DNMT1-221ENST00000589538 C17orf99Q6UX52 265 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
DNMT1-221ENST00000589538 KIAA1683Q9H0B3 1180 aa19.6■□□□□ 0.73
DNMT1-221ENST00000589538 ADGRA2Q96PE1 1338 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 GUCY1A2P33402 732 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 SEPT2Q15019 361 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 TTC22Q5TAA0 569 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 IFFO2Q5TF58 517 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms