RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 WDR18Q9BV38 432 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 DCP1AQ9NPI6 582 aaPredicted RBP24.62■■□□□ 1.53
SS18-224ENST00000584083 AGTPBP1Q9UPW5 1226 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 SLC45A1Q9Y2W3 748 aa24.62■■□□□ 1.53
SS18-224ENST00000584083 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
SS18-224ENST00000584083 PRKAB2O43741 272 aa24.61■■□□□ 1.53
SS18-224ENST00000584083 ECM2O94769 699 aaPredicted RBP24.61■■□□□ 1.53
SS18-224ENST00000584083 LACTBP83111 547 aaPredicted RBP24.61■■□□□ 1.53
SS18-224ENST00000584083 TATDN1Q6P1N9 297 aa24.61■■□□□ 1.53
SS18-224ENST00000584083 PROCA1Q8NCQ7 364 aaPredicted RBP24.61■■□□□ 1.53
SS18-224ENST00000584083 PTPN22Q9Y2R2 807 aa24.61■■□□□ 1.53
SS18-224ENST00000584083 ZSWIM8A7E2V4 1837 aa24.61■■□□□ 1.53
SS18-224ENST00000584083 ADGRA2Q96PE1 1338 aa24.61■■□□□ 1.53
SS18-224ENST00000584083 GH2P01242 217 aa24.6■■□□□ 1.53
SS18-224ENST00000584083 CERKLQ49MI3 558 aaPredicted RBP24.6■■□□□ 1.53
SS18-224ENST00000584083 TREML2Q5T2D2 321 aa24.6■■□□□ 1.53
SS18-224ENST00000584083 EXOC6Q8TAG9 804 aa24.6■■□□□ 1.53
SS18-224ENST00000584083 DDRGK1Q96HY6 314 aa24.6■■□□□ 1.53
SS18-224ENST00000584083 ATP8A2Q9NTI2 1148 aa24.6■■□□□ 1.53
SS18-224ENST00000584083 LOC285556D6RIA3 1793 aa24.59■■□□□ 1.53
SS18-224ENST00000584083 GLRX3O76003 335 aaKnown RBP24.59■■□□□ 1.53
SS18-224ENST00000584083 MX1P20591 662 aa24.59■■□□□ 1.53
SS18-224ENST00000584083 MTMR2Q13614 643 aa24.59■■□□□ 1.53
SS18-224ENST00000584083 SMCR8Q8TEV9 937 aaPredicted RBP24.59■■□□□ 1.53
SS18-224ENST00000584083 ARHGAP39Q9C0H5 1083 aa24.59■■□□□ 1.53
SS18-224ENST00000584083 PUS7LQ9H0K6 701 aaKnown RBP24.59■■□□□ 1.53
SS18-224ENST00000584083 SLC4A4Q9Y6R1 1079 aa24.59■■□□□ 1.53
SS18-224ENST00000584083 CYP2D6P10635 497 aa24.58■■□□□ 1.53
SS18-224ENST00000584083 SOX10P56693 466 aa24.58■■□□□ 1.53
SS18-224ENST00000584083 BACE1P56817 501 aa24.58■■□□□ 1.53
SS18-224ENST00000584083 PABPC4Q13310 644 aaKnown RBP eCLIP24.58■■□□□ 1.53
SS18-224ENST00000584083 ABCB5Q2M3G0 1257 aa24.58■■□□□ 1.53
SS18-224ENST00000584083 PI4K2BQ8TCG2 481 aa24.58■■□□□ 1.53
SS18-224ENST00000584083 RWDD1Q9H446 243 aaPredicted RBP24.58■■□□□ 1.53
SS18-224ENST00000584083 TMOD4Q9NZQ9 345 aa24.58■■□□□ 1.53
SS18-224ENST00000584083 PNMA3Q9UL41 463 aa24.58■■□□□ 1.53
SS18-224ENST00000584083 MYH8P13535 1937 aa24.57■■□□□ 1.52
SS18-224ENST00000584083 USP17L10C9JJH3 530 aa24.57■■□□□ 1.52
SS18-224ENST00000584083 RNF113AO15541 343 aaKnown RBP24.57■■□□□ 1.52
SS18-224ENST00000584083 ZFYP08048 801 aaPredicted RBP24.57■■□□□ 1.52
SS18-224ENST00000584083 SHMT1P34896 483 aa24.57■■□□□ 1.52
SS18-224ENST00000584083 LRRFIP1Q32MZ4 808 aaKnown RBP24.57■■□□□ 1.52
SS18-224ENST00000584083 SH3D19Q5HYK7 790 aa24.57■■□□□ 1.52
SS18-224ENST00000584083 AMOTL1Q8IY63 956 aa24.57■■□□□ 1.52
SS18-224ENST00000584083 CABP5Q9NP86 173 aa24.57■■□□□ 1.52
SS18-224ENST00000584083 C19orf81C9J6K1 198 aa24.56■■□□□ 1.52
SS18-224ENST00000584083 BCRP11274 1271 aa24.56■■□□□ 1.52
SS18-224ENST00000584083 PSMC4P43686 418 aa24.56■■□□□ 1.52
SS18-224ENST00000584083 EVX2Q03828 476 aa24.56■■□□□ 1.52
SS18-224ENST00000584083 GABPAQ06546 454 aa24.56■■□□□ 1.52
SS18-224ENST00000584083 RAB3GAP1Q15042 981 aa24.56■■□□□ 1.52
SS18-224ENST00000584083 APPBP2Q92624 585 aa24.56■■□□□ 1.52
SS18-224ENST00000584083 FMNL1O95466 1100 aaPredicted RBP24.55■■□□□ 1.52
SS18-224ENST00000584083 GNRH1P01148 92 aa24.55■■□□□ 1.52
SS18-224ENST00000584083 OSBPP22059 807 aa24.55■■□□□ 1.52
SS18-224ENST00000584083 MGAMO43451 1857 aa24.55■■□□□ 1.52
SS18-224ENST00000584083 USP17L12C9JPN9 530 aa24.54■■□□□ 1.52
SS18-224ENST00000584083 USP17L21D6R901 530 aa24.54■■□□□ 1.52
SS18-224ENST00000584083 OSBP2Q969R2 916 aa24.54■■□□□ 1.52
SS18-224ENST00000584083 STRBPQ96SI9 672 aaKnown RBP24.54■■□□□ 1.52
SS18-224ENST00000584083 FEZ1Q99689 392 aa24.54■■□□□ 1.52
SS18-224ENST00000584083 FSD1Q9BTV5 496 aa24.54■■□□□ 1.52
SS18-224ENST00000584083 PTCH2Q9Y6C5 1203 aa24.54■■□□□ 1.52
SS18-224ENST00000584083 CYP2D7A0A087X1C5 515 aa24.53■■□□□ 1.52
SS18-224ENST00000584083 MPHOSPH10O00566 681 aaKnown RBP24.53■■□□□ 1.52
SS18-224ENST00000584083 RGS19P49795 217 aa24.53■■□□□ 1.52
SS18-224ENST00000584083 SLC44A5Q8NCS7 719 aa24.53■■□□□ 1.52
SS18-224ENST00000584083 DYNLL2Q96FJ2 89 aa24.53■■□□□ 1.52
SS18-224ENST00000584083 TRIM47Q96LD4 638 aa24.53■■□□□ 1.52
SS18-224ENST00000584083 ASCC2Q9H1I8 757 aaPredicted RBP24.53■■□□□ 1.52
SS18-224ENST00000584083 SWAP70Q9UH65 585 aa24.53■■□□□ 1.52
SS18-224ENST00000584083 SALL3Q9BXA9 1300 aa24.53■■□□□ 1.52
SS18-224ENST00000584083 HOXD10P28358 340 aa24.52■■□□□ 1.52
SS18-224ENST00000584083 CTGFP29279 349 aa24.52■■□□□ 1.52
SS18-224ENST00000584083 C12orf60Q5U649 245 aa24.52■■□□□ 1.52
SS18-224ENST00000584083 B4GALNT3Q6L9W6 998 aa24.52■■□□□ 1.52
SS18-224ENST00000584083 USP17L2Q6R6M4 530 aa24.52■■□□□ 1.52
SS18-224ENST00000584083 ANKRD13CQ8N6S4 541 aa24.52■■□□□ 1.52
SS18-224ENST00000584083 LNPKQ9C0E8 428 aa24.52■■□□□ 1.52
SS18-224ENST00000584083 PRMT2P55345 433 aa24.51■■□□□ 1.51
SS18-224ENST00000584083 FCGRTP55899 365 aa24.51■■□□□ 1.51
SS18-224ENST00000584083 IRX3P78415 501 aaPredicted RBP24.51■■□□□ 1.51
SS18-224ENST00000584083 ZYXQ15942 572 aaKnown RBP24.51■■□□□ 1.51
SS18-224ENST00000584083 SLC9C1Q4G0N8 1177 aa24.51■■□□□ 1.51
SS18-224ENST00000584083 SMC5Q8IY18 1101 aa24.51■■□□□ 1.51
SS18-224ENST00000584083 STAP2Q9UGK3 403 aa24.51■■□□□ 1.51
SS18-224ENST00000584083 TAOK2Q9UL54 1235 aa24.51■■□□□ 1.51
SS18-224ENST00000584083 GPAA1O43292 621 aa24.5■■□□□ 1.51
SS18-224ENST00000584083 IGHDP01880 384 aa24.5■■□□□ 1.51
SS18-224ENST00000584083 GCLCP48506 637 aaPredicted RBP24.5■■□□□ 1.51
SS18-224ENST00000584083 PDE1AP54750 535 aa24.5■■□□□ 1.51
SS18-224ENST00000584083 MLLT1Q03111 559 aaPredicted RBP24.5■■□□□ 1.51
SS18-224ENST00000584083 SEPT2Q15019 361 aa24.5■■□□□ 1.51
SS18-224ENST00000584083 CTR9Q6PD62 1173 aa24.5■■□□□ 1.51
SS18-224ENST00000584083 EMILIN3Q9NT22 766 aa24.5■■□□□ 1.51
SS18-224ENST00000584083 M0R2C6 588 aa24.49■■□□□ 1.51
SS18-224ENST00000584083 NBPF11Q86T75 865 aa24.49■■□□□ 1.51
SS18-224ENST00000584083 ACER1Q8TDN7 264 aa24.49■■□□□ 1.51
SS18-224ENST00000584083 SRRDQ9UH36 339 aa24.49■■□□□ 1.51
SS18-224ENST00000584083 GSG1L2A8MUP6 293 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms