RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
CDC42EP4-206ENST00000581014 LCORLQ8N3X6 602 aa20.5■□□□□ 0.87
CDC42EP4-206ENST00000581014 GPATCH3Q96I76 525 aa20.5■□□□□ 0.87
CDC42EP4-206ENST00000581014 TRIM47Q96LD4 638 aa20.5■□□□□ 0.87
CDC42EP4-206ENST00000581014 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
CDC42EP4-206ENST00000581014 DCP1AQ9NPI6 582 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP4-206ENST00000581014 PTCH2Q9Y6C5 1203 aa20.5■□□□□ 0.87
CDC42EP4-206ENST00000581014 HOXD10P28358 340 aa20.49■□□□□ 0.87
CDC42EP4-206ENST00000581014 PSMC4P43686 418 aa20.49■□□□□ 0.87
CDC42EP4-206ENST00000581014 PLCD1P51178 756 aa20.49■□□□□ 0.87
CDC42EP4-206ENST00000581014 AAMPQ13685 434 aa20.49■□□□□ 0.87
CDC42EP4-206ENST00000581014 SRRDQ9UH36 339 aa20.49■□□□□ 0.87
CDC42EP4-206ENST00000581014 KIAA0100Q14667 2235 aaKnown RBP20.49■□□□□ 0.87
CDC42EP4-206ENST00000581014 USP17L10C9JJH3 530 aa20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 GDF11O95390 407 aa20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 HOXA7P31268 230 aaPredicted RBP20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 NBPF11Q86T75 865 aa20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 SMCR8Q8TEV9 937 aaPredicted RBP20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 ZNF333Q96JL9 665 aa20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 ATP8A2Q9NTI2 1148 aa20.48■□□□□ 0.87
CDC42EP4-206ENST00000581014 GH2P01242 217 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 POLR3DP05423 398 aaPredicted RBP20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 SHMT1P34896 483 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 GCLCP48506 637 aaPredicted RBP20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 FCGRTP55899 365 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 MTMR2Q13614 643 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 SLC4A8Q2Y0W8 1093 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 SDR42E1Q8WUS8 393 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 ARMT1Q9H993 441 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 MCM9Q9NXL9 1143 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 TTC41PQ6P2S7 1318 aa20.47■□□□□ 0.87
CDC42EP4-206ENST00000581014 MBD4O95243 580 aa20.46■□□□□ 0.87
CDC42EP4-206ENST00000581014 FMNL1O95466 1100 aaPredicted RBP20.46■□□□□ 0.87
CDC42EP4-206ENST00000581014 OSBPP22059 807 aa20.46■□□□□ 0.87
CDC42EP4-206ENST00000581014 FAM110CQ1W6H9 321 aa20.46■□□□□ 0.87
CDC42EP4-206ENST00000581014 SLC9C1Q4G0N8 1177 aa20.46■□□□□ 0.87
CDC42EP4-206ENST00000581014 KBTBD3Q8NAB2 608 aa20.46■□□□□ 0.87
CDC42EP4-206ENST00000581014 TMOD4Q9NZQ9 345 aa20.46■□□□□ 0.87
CDC42EP4-206ENST00000581014 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
CDC42EP4-206ENST00000581014 SLFNL1Q499Z3 407 aa20.45■□□□□ 0.86
CDC42EP4-206ENST00000581014 C12orf42Q96LP6 360 aa20.45■□□□□ 0.86
CDC42EP4-206ENST00000581014 ASCC2Q9H1I8 757 aaPredicted RBP20.45■□□□□ 0.86
CDC42EP4-206ENST00000581014 LOC285556D6RIA3 1793 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 PRKAB2O43741 272 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 CHGBP05060 677 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 ABCB5Q2M3G0 1257 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 PUS7LQ9H0K6 701 aaKnown RBP20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 EMILIN3Q9NT22 766 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 SWAP70Q9UH65 585 aa20.44■□□□□ 0.86
CDC42EP4-206ENST00000581014 ZFYP08048 801 aaPredicted RBP20.43■□□□□ 0.86
CDC42EP4-206ENST00000581014 USP17L2Q6R6M4 530 aa20.43■□□□□ 0.86
CDC42EP4-206ENST00000581014 MORF4L1Q9UBU8 362 aa20.43■□□□□ 0.86
CDC42EP4-206ENST00000581014 DDX60LQ5H9U9 1706 aaKnown RBP20.43■□□□□ 0.86
CDC42EP4-206ENST00000581014 BRCA2P51587 3418 aa20.43■□□□□ 0.86
CDC42EP4-206ENST00000581014 ERC2O15083 957 aa20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 C12orf60Q5U649 245 aa20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 ANKRD13CQ8N6S4 541 aa20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 PI4K2BQ8TCG2 481 aa20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 GCC1Q96CN9 775 aa20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 STRBPQ96SI9 672 aaKnown RBP20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 KIAA1683Q9H0B3 1180 aa20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 MYPNQ86TC9 1320 aa20.42■□□□□ 0.86
CDC42EP4-206ENST00000581014 MYH1P12882 1939 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 GLRX3O76003 335 aaKnown RBP20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 ECM2O94769 699 aaPredicted RBP20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 GUCY1A2P33402 732 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 USP14P54578 494 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 EVX2Q03828 476 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 PRKCZQ05513 592 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 TSHZ3Q63HK5 1081 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 RAET1EQ8TD07 263 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 APPBP2Q92624 585 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 SLC4A4Q9Y6R1 1079 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 SALL3Q9BXA9 1300 aa20.41■□□□□ 0.86
CDC42EP4-206ENST00000581014 RNF113AO15541 343 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 CYP2D6P10635 497 aa20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 IRX3P78415 501 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 IRF5Q13568 498 aa20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 RAB3GAP1Q15042 981 aa20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 LRRFIP1Q32MZ4 808 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 PRPF38BQ5VTL8 546 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 GIMAP6Q6P9H5 292 aa20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 SH3TC2Q8TF17 1288 aa20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 GTF3C2Q8WUA4 911 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 DDRGK1Q96HY6 314 aa20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 P2RX7Q99572 595 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 TMEM106CQ9BVX2 250 aa20.4■□□□□ 0.86
CDC42EP4-206ENST00000581014 MKI67P46013 3256 aaKnown RBP20.39■□□□□ 0.86
CDC42EP4-206ENST00000581014 USP17L12C9JPN9 530 aa20.39■□□□□ 0.85
CDC42EP4-206ENST00000581014 USP17L21D6R901 530 aa20.39■□□□□ 0.85
CDC42EP4-206ENST00000581014 TNPO2O14787 897 aaKnown RBP20.39■□□□□ 0.85
CDC42EP4-206ENST00000581014 MX1P20591 662 aa20.39■□□□□ 0.85
CDC42EP4-206ENST00000581014 GRK4P32298 578 aa20.39■□□□□ 0.85
CDC42EP4-206ENST00000581014 HERVK_113P62684 666 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms