RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CCL15Q16663 113 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CERKLQ49MI3 558 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 TATDN1Q6P1N9 297 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CTR9Q6PD62 1173 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CCDC129Q6ZRS4 1044 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 AS3MTQ9HBK9 375 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CABP5Q9NP86 173 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ZBTB21Q9ULJ3 1066 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ZHX2Q9Y6X8 837 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ROBO3Q96MS0 1386 aa15.18■□□□□ 0.02
CDK5RAP3-203ENST00000577442 PHIPQ8WWQ0 1821 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 PTPRFP10586 1907 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 TESPA1A2RU30 521 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 GDF11O95390 407 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 SLC3A2P08195 630 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CTCFP49711 727 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ZNF287Q9HBT7 754 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ZMYM6O95789 1325 aa15.17■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CYP2D7A0A087X1C5 515 aa15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 MINDY4BA8MYZ0 360 aa15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 RRP1BQ14684 758 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ALX1Q15699 326 aa15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ABCB5Q2M3G0 1257 aa15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 BMP2KLQ5H9B9 411 aa15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CCDC17Q96LX7 622 aa15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ZCCHC17Q9NP64 241 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-203ENST00000577442 GH2P01242 217 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 CDK8P49336 464 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 ZNF280CQ8ND82 737 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 BRI3BPQ8WY22 251 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 DYNLL2Q96FJ2 89 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 RNF186Q9NXI6 227 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 AFG3L2Q9Y4W6 797 aa15.15■□□□□ 0.02
CDK5RAP3-203ENST00000577442 A0A0G2JLL6 359 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 TRIM75PA6NK02 468 aa15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 MPHOSPH10O00566 681 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 FOXN1O15353 648 aa15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 TRPA1O75762 1119 aa15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 HSPD1P10809 573 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PRRT2Q7Z6L0 340 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
CDK5RAP3-203ENST00000577442 IGF2BP3O00425 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 CHMLP26374 656 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 EVX2Q03828 476 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PDE4BQ07343 736 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PPARAQ07869 468 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SPP2Q13103 211 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 RAB3GAP1Q15042 981 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 VPS53Q5VIR6 699 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 CCDC84Q86UT8 332 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 CFHR5Q9BXR6 569 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 MKNK2Q9HBH9 465 aa15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-203ENST00000577442 LOC285556D6RIA3 1793 aa15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 FOXP2O15409 715 aa15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 HSPA8P11142 646 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 ANKRD23Q86SG2 305 aa15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PROCA1Q8NCQ7 364 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 FEZ1Q99689 392 aa15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 DSCC1Q9BVC3 393 aa15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 LAMA4Q16363 1823 aa15.12■□□□□ 0.01
CDK5RAP3-203ENST00000577442 C19orf81C9J6K1 198 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 BTBD19C9JJ37 291 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 USP17L10C9JJH3 530 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 FGAP02671 866 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 AKR1B1P15121 316 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 BACE1P56817 501 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 JAG1P78504 1218 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 TAF1CQ15572 869 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 GADL1Q6ZQY3 521 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SKAP1Q86WV1 359 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PTPN18Q99952 460 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 CTNNA3Q9UI47 895 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SMIM22K7EJ46 135 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PCP11498 1178 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 RASA1P20936 1047 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 USP14P54578 494 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 HMGCS2P54868 508 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 ICA1Q05084 483 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 PABPC4Q13310 644 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 MTMR2Q13614 643 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SEPT2Q15019 361 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SHROOM1Q2M3G4 852 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 NOM1Q5C9Z4 860 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 SH3D19Q5HYK7 790 aa15.1■□□□□ 0.01
CDK5RAP3-203ENST00000577442 ZNF444Q8N0Y2 327 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms