RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 MCAMP43121 646 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 HERVK_113P62684 666 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 LRIT3Q3SXY7 679 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 TDHQ8IZJ6 230 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 GTF3C2Q8WUA4 911 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 AATFQ9NY61 560 aaKnown RBP eCLIP14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 CDK5RAP2Q96SN8 1893 aa14.31□□□□□ -0.12
CTDNEP1-212ENST00000576613 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
CTDNEP1-212ENST00000576613 GNAI2P04899 355 aa14.3□□□□□ -0.12
CTDNEP1-212ENST00000576613 MAGEA10P43363 369 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-212ENST00000576613 MNX1P50219 401 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-212ENST00000576613 FOXP4Q8IVH2 680 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-212ENST00000576613 DEFB123Q8N688 67 aa14.3□□□□□ -0.12
CTDNEP1-212ENST00000576613 P2RX7Q99572 595 aaKnown RBP14.3□□□□□ -0.12
CTDNEP1-212ENST00000576613 RGS2P41220 211 aa14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 RARSP54136 660 aaKnown RBP14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 TTC39AQ5SRH9 613 aa14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 ATF7IPQ6VMQ6 1270 aa14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 METTL16Q86W50 562 aaKnown RBP14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 TGFBRAP1Q8WUH2 860 aa14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 CWC22Q9HCG8 908 aaKnown RBP14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 FLT1P17948 1338 aa14.29□□□□□ -0.12
CTDNEP1-212ENST00000576613 PFASO15067 1338 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 IPO8O15397 1037 aaKnown RBP14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 IGSF3O75054 1194 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 HLA-DOAP06340 250 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 PPP4CP60510 307 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 ERVK-9P63128 1117 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 ERVK-24P63145 666 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 MAPKAPK5Q8IW41 473 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 TXNRD2Q9NNW7 524 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
CTDNEP1-212ENST00000576613 GDF11O95390 407 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 COL6A1P12109 1028 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 CACNB2Q08289 660 aaPredicted RBP14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 GPR142Q7Z601 462 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 APBA2Q99767 749 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 PAGR1Q9BTK6 254 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 DNAJC18Q9H819 358 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 SNRKQ9NRH2 765 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 RBPJLQ9UBG7 517 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 PALD1Q9ULE6 856 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 STXBP5LQ9Y2K9 1186 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 FRMPD3Q5JV73 1810 aa14.27□□□□□ -0.13
CTDNEP1-212ENST00000576613 PNMA6EA0A0J9YXQ4 647 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 PEX10O60683 326 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 GLRX3O76003 335 aaKnown RBP14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 CCNA1P78396 465 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 JAG1P78504 1218 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L2Q6R6M4 530 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 Q7L0L9 218 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP6NLQ92738 828 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 PORCNQ9H237 461 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 CUL9Q8IWT3 2517 aa14.26□□□□□ -0.13
CTDNEP1-212ENST00000576613 CYP2E1P05181 493 aaPredicted RBP14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 CCND3P30281 292 aaPredicted RBP14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 OS9Q13438 667 aaPredicted RBP14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 CCL14Q16627 93 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 MORN1Q5T089 497 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 LHX8Q68G74 356 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 CERS3Q8IU89 383 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 FEZ1Q99689 392 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 EMILIN3Q9NT22 766 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 MTMR10Q9NXD2 777 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 SAP30BPQ9UHR5 308 aaKnown RBP14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
CTDNEP1-212ENST00000576613 MYH1P12882 1939 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 GH2P01242 217 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 TRIM27P14373 513 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 MAP2K5Q13163 448 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 LRRC26Q2I0M4 334 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 Q3C1V9 767 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 MFSD14CQ5VZR4 134 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 ZNF512BQ96KM6 892 aaPredicted RBP14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 RABGAP1Q9Y3P9 1069 aa14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 MYO5AQ9Y4I1 1855 aaKnown RBP14.24□□□□□ -0.13
CTDNEP1-212ENST00000576613 DNAH12Q6ZR08 3092 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 MSCO60682 206 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP14P54578 494 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 WDR78Q5VTH9 848 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms