RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 ANKLE1Q8NAG6 615 aa10.09□□□□□ -0.79
NPLOC4-211ENST00000573212 AGTPBP1Q9UPW5 1226 aa10.09□□□□□ -0.79
NPLOC4-211ENST00000573212 LRRFIP2Q9Y608 721 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-211ENST00000573212 RFX7Q2KHR2 1363 aa10.09□□□□□ -0.79
NPLOC4-211ENST00000573212 GPR75-ASB3A0A0A6YYF3 556 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 TRAK2O60296 914 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 IL15P40933 162 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 FAM110CQ1W6H9 321 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 TREML2Q5T2D2 321 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 CCDC102BQ68D86 513 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 NECAB2Q7Z6G3 386 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 CCDC84Q86UT8 332 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 ZGPATQ8N5A5 531 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 PROCA1Q8NCQ7 364 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 ZNF384Q8TF68 577 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 COA7Q96BR5 231 aa10.08□□□□□ -0.8
NPLOC4-211ENST00000573212 PDS5AQ29RF7 1337 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 TRIM75PA6NK02 468 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 PLCG2P16885 1265 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 ADORA1P30542 326 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 GCLCP48506 637 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 TIMM10P62072 90 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 MCM6Q14566 821 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 RRP1BQ14684 758 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 ANKRD13CQ8N6S4 541 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 SMCR8Q8TEV9 937 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 DIS3LQ8TF46 1054 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 SIL1Q9H173 461 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 COPRSQ9NQ92 184 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 NPDC1Q9NQX5 325 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 RPTORQ8N122 1335 aa10.07□□□□□ -0.8
NPLOC4-211ENST00000573212 ANP32CO43423 234 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 BTDP43251 543 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 TRIM32Q13049 653 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 SPP2Q13103 211 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 RASGRF1Q13972 1273 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 LRIT3Q3SXY7 679 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 ALDH1L2Q3SY69 923 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 ZSCAN29Q8IWY8 852 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 TBC1D2Q9BYX2 928 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 MORF4L1Q9UBU8 362 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 OGDHLQ9ULD0 1010 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 PA2G4Q9UQ80 394 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 MROH7-TTC4A0A0A0MT08 1334 aa10.06□□□□□ -0.8
NPLOC4-211ENST00000573212 E9PSI1 815 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 HMGCRP04035 888 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 CLCN1P35523 988 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 CAP2P40123 477 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 SLFN5Q08AF3 891 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 PICALMQ13492 652 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 MAP3K21Q5TCX8 1036 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 SPTY2D1Q68D10 685 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 POTEHQ6S545 545 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 FAM9BQ8IZU0 186 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 ZNF280CQ8ND82 737 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 NBPF3Q9H094 633 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 ASCC2Q9H1I8 757 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 ABCF2Q9UG63 623 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
NPLOC4-211ENST00000573212 LAMA3Q16787 3333 aa10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 UBTFL1P0CB47 393 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 HOXA7P31268 230 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 MECOMQ03112 1051 aa10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 TRMT2AQ8IZ69 625 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 NSUN4Q96CB9 384 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 XAGE2Q96GT9 111 aa10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 P2RX7Q99572 595 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 WDR18Q9BV38 432 aa10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 ZMYND8Q9ULU4 1186 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-211ENST00000573212 A0A1B0GUL7 405 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 FAM196BA6NMK8 535 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 USP17L5A8MUK1 530 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 LDHCP07864 332 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 COL6A1P12109 1028 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 XRCC5P13010 732 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 HMGCS2P54868 508 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 DEFB123Q8N688 67 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 TRIB2Q92519 343 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 USP6NLQ92738 828 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 CDHR5Q9HBB8 845 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 GPCPD1Q9NPB8 672 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 MTMR10Q9NXD2 777 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 HMG20BQ9P0W2 317 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 STXBP5LQ9Y2K9 1186 aa10.03□□□□□ -0.8
NPLOC4-211ENST00000573212 MAGEA10P43363 369 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-211ENST00000573212 BACE1P56817 501 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms