RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 VGLL4Q14135 290 aa11.56□□□□□ -0.56
NPLOC4-210ENST00000572824 SLC10A4Q96EP9 437 aa11.56□□□□□ -0.56
NPLOC4-210ENST00000572824 SLC6A16Q9GZN6 736 aa11.56□□□□□ -0.56
NPLOC4-210ENST00000572824 HMX1Q9NP08 348 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-210ENST00000572824 SERPINA10Q9UK55 444 aa11.56□□□□□ -0.56
NPLOC4-210ENST00000572824 PTPRFP10586 1907 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 RBBP6Q7Z6E9 1792 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 EYA2O00167 538 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 MYO1BO43795 1136 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 PRDX5P30044 214 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 CRHR2Q13324 411 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 APOBEC3HQ6NTF7 200 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 VPS37DQ86XT2 251 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 CD99L2Q8TCZ2 262 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 OPTNQ96CV9 577 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 PPP2R3BQ9Y5P8 575 aa11.55□□□□□ -0.56
NPLOC4-210ENST00000572824 PHIPQ8WWQ0 1821 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 FKTNO75072 461 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 PHKA1P46020 1223 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 SREBF2Q12772 1141 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 NFIAQ12857 509 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 PUM3Q15397 648 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 BRI3BPQ8WY22 251 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 SNCAIPQ9Y6H5 919 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 CDK5RAP2Q96SN8 1893 aa11.54□□□□□ -0.56
NPLOC4-210ENST00000572824 PPP1R12BO60237 982 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 ZBTB48P10074 688 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 PTPRNQ16849 979 aa11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 OTOP1Q7RTM1 612 aa11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 FAM43AQ8N2R8 423 aa11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.53□□□□□ -0.561e-6■■■■■ 29.6
NPLOC4-210ENST00000572824 ZKSCAN4Q969J2 545 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 DAGLAQ9Y4D2 1042 aa11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
NPLOC4-210ENST00000572824 MANSC4A6NHS7 340 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 UBTFL1P0CB47 393 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 INPP5BP32019 993 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 IREB2P48200 963 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 MMP14P50281 582 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 RARSP54136 660 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 ATP2B3Q16720 1220 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 SUPT20HL1Q3ZLR7 823 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 ANKRD13AQ8IZ07 590 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 TEKT1Q969V4 418 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 CLUAP1Q96AJ1 413 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 TRIM34Q9BYJ4 488 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 ARHGAP39Q9C0H5 1083 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 TRIM17Q9Y577 477 aa11.52□□□□□ -0.57
NPLOC4-210ENST00000572824 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 APBB1O00213 710 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 BCAR3O75815 825 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 S1PR4O95977 384 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 IFIT1P09914 478 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 SLC5A1P13866 664 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 TCP10Q12799 353 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 CAVIN4Q5BKX8 364 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 ZDHHC15Q96MV8 337 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 WRNIP1Q96S55 665 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 RFX7Q2KHR2 1363 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 MGAMO43451 1857 aa11.51□□□□□ -0.57
NPLOC4-210ENST00000572824 CCL15-CCL14A0A0B4J2E2 113 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 F12P00748 615 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 TNFAIP1Q13829 316 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 CCL15Q16663 113 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 CDC42EP5Q6NZY7 148 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 FBXO46Q6PJ61 603 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 EPS8L1Q8TE68 723 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 ZNF384Q8TF68 577 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 LPIN2Q92539 896 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 ATRNL1Q5VV63 1379 aa11.5□□□□□ -0.57
NPLOC4-210ENST00000572824 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 TRIM27P14373 513 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 CTGFP29279 349 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 TIMM10P62072 90 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 TFCP2Q12800 502 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 RASGRF1Q13972 1273 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 NR6A1Q15406 480 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 NOM1Q5C9Z4 860 aaKnown RBP11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 TBC1D22AQ8WUA7 517 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 EVA1BQ9NVM1 165 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 KIF16BQ96L93 1317 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 RPAP1Q9BWH6 1393 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 MAST2Q6P0Q8 1798 aa11.49□□□□□ -0.57
NPLOC4-210ENST00000572824 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 A6NJR5 290 aa11.48□□□□□ -0.57
NPLOC4-210ENST00000572824 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms