RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 TRPM7Q96QT4 1865 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 GFRA3O60609 400 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 RHOQP17081 205 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 PKDCCQ504Y2 493 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 TMC7Q7Z402 723 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 CFAP53Q96M91 514 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 ZIC5Q96T25 663 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 BCL2L13Q9BXK5 485 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 GLIS2Q9BZE0 524 aaPredicted RBP11.53□□□□□ -0.56
CFDP1-206ENST00000566254 GPC6Q9Y625 555 aaPredicted RBP11.53□□□□□ -0.56
CFDP1-206ENST00000566254 ABCC12Q96J65 1359 aa11.53□□□□□ -0.56
CFDP1-206ENST00000566254 PDE4DIPQ5VU43 2346 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 FIGNL2A6NMB9 653 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 BTBD11A6QL63 1104 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 GNAT3A8MTJ3 354 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 NRG2O14511 850 aaPredicted RBP11.52□□□□□ -0.57
CFDP1-206ENST00000566254 AXIN1O15169 862 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 ATP4AP20648 1035 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 ZAP70P43403 619 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 CRIPAKQ8N1N5 446 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 ZFP42Q96MM3 310 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
CFDP1-206ENST00000566254 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
CFDP1-206ENST00000566254 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
CFDP1-206ENST00000566254 HLFQ16534 295 aa11.51□□□□□ -0.57
CFDP1-206ENST00000566254 HIF1AQ16665 826 aa11.51□□□□□ -0.57
CFDP1-206ENST00000566254 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
CFDP1-206ENST00000566254 TREML1Q86YW5 311 aa11.51□□□□□ -0.57
CFDP1-206ENST00000566254 NIM1KQ8IY84 436 aa11.51□□□□□ -0.57
CFDP1-206ENST00000566254 HHIPL1Q96JK4 782 aa11.51□□□□□ -0.57
CFDP1-206ENST00000566254 ADARB2Q9NS39 739 aaKnown RBP11.51□□□□□ -0.57
CFDP1-206ENST00000566254 A0A1B0GTH6 734 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 TGFBR3LH3BV60 316 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 MZF1P28698 734 aaPredicted RBP11.5□□□□□ -0.57
CFDP1-206ENST00000566254 COL19A1Q14993 1142 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 AOC3Q16853 763 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 TIMMDC1Q9NPL8 285 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 NUDCQ9Y266 331 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 CEMIPQ8WUJ3 1361 aa11.5□□□□□ -0.57
CFDP1-206ENST00000566254 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 PPIP5K2O43314 1243 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 MICAL2O94851 1124 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 IGHA2P01877 340 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 ZNF16P17020 682 aaPredicted RBP11.49□□□□□ -0.57
CFDP1-206ENST00000566254 MSX1P28360 303 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 GMPSP49915 693 aaPredicted RBP11.49□□□□□ -0.57
CFDP1-206ENST00000566254 NOGQ13253 232 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 ZNF280CQ8ND82 737 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 GIPC2Q8TF65 315 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 EDEM1Q92611 657 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 RPGRQ92834 1020 aaKnown RBP11.49□□□□□ -0.57
CFDP1-206ENST00000566254 FAM129BQ96TA1 746 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 POLIQ9UNA4 740 aa11.49□□□□□ -0.57
CFDP1-206ENST00000566254 E9PSI1 815 aa11.48□□□□□ -0.57
CFDP1-206ENST00000566254 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
CFDP1-206ENST00000566254 DNM1Q05193 864 aaKnown RBP11.48□□□□□ -0.57
CFDP1-206ENST00000566254 IER5Q5VY09 327 aa11.48□□□□□ -0.57
CFDP1-206ENST00000566254 DLK2Q6UY11 383 aa11.48□□□□□ -0.57
CFDP1-206ENST00000566254 HSH2DQ96JZ2 352 aa11.48□□□□□ -0.57
CFDP1-206ENST00000566254 DMGDHQ9UI17 866 aaKnown RBP11.48□□□□□ -0.57
CFDP1-206ENST00000566254 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
CFDP1-206ENST00000566254 TREHO43280 583 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 PDGFAP04085 211 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 U2AF1L5P0DN76 240 aaPredicted RBP11.47□□□□□ -0.57
CFDP1-206ENST00000566254 HUNKP57058 714 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 U2AF1Q01081 240 aaKnown RBP eCLIP11.47□□□□□ -0.57
CFDP1-206ENST00000566254 CXCL9Q07325 125 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 GJD3Q8N144 294 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 TRPM4Q8TD43 1214 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 DMRTB1Q96MA1 342 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 ANKIB1Q9P2G1 1089 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 PGAP2Q9UHJ9 254 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 DNMT3LQ9UJW3 386 aa11.47□□□□□ -0.57
CFDP1-206ENST00000566254 SHTN1A0MZ66 631 aa11.46□□□□□ -0.57
CFDP1-206ENST00000566254 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
CFDP1-206ENST00000566254 PRKAR2BP31323 418 aa11.46□□□□□ -0.57
CFDP1-206ENST00000566254 USP5P45974 858 aa11.46□□□□□ -0.57
CFDP1-206ENST00000566254 DSC3Q14574 896 aa11.46□□□□□ -0.57
CFDP1-206ENST00000566254 ARSJQ5FYB0 599 aaPredicted RBP11.46□□□□□ -0.57
CFDP1-206ENST00000566254 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.57
CFDP1-206ENST00000566254 NGEFQ8N5V2 710 aa11.46□□□□□ -0.57
CFDP1-206ENST00000566254 NYXQ9GZU5 481 aa11.46□□□□□ -0.57
CFDP1-206ENST00000566254 COL3A1P02461 1466 aaPredicted RBP11.45□□□□□ -0.58
CFDP1-206ENST00000566254 RIC1Q4ADV7 1423 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 FAM155AB1AL88 458 aaPredicted RBP11.45□□□□□ -0.58
CFDP1-206ENST00000566254 OPLAHO14841 1288 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 NEFMP07197 916 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 GPTP24298 496 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 USP48Q86UV5 1035 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 GPR152Q8TDT2 470 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 RTF1Q92541 710 aaKnown RBP11.45□□□□□ -0.58
CFDP1-206ENST00000566254 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
CFDP1-206ENST00000566254 PHACTR3Q96KR7 559 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 ZNRF3Q9ULT6 936 aa11.45□□□□□ -0.58
CFDP1-206ENST00000566254 UBN2Q6ZU65 1347 aa11.44□□□□□ -0.58
CFDP1-206ENST00000566254 GPR182O15218 404 aa11.44□□□□□ -0.58
CFDP1-206ENST00000566254 TRPA1O75762 1119 aa11.44□□□□□ -0.58
CFDP1-206ENST00000566254 RAD17O75943 681 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms