RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 RARSP54136 660 aaKnown RBP16.47■□□□□ 0.23
COMMD4-214ENST00000566230 HERVK_113P62684 666 aa16.47■□□□□ 0.23
COMMD4-214ENST00000566230 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-214ENST00000566230 LRIT3Q3SXY7 679 aa16.47■□□□□ 0.23
COMMD4-214ENST00000566230 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
COMMD4-214ENST00000566230 METTL16Q86W50 562 aaKnown RBP16.47■□□□□ 0.23
COMMD4-214ENST00000566230 USP6NLQ92738 828 aa16.47■□□□□ 0.23
COMMD4-214ENST00000566230 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
COMMD4-214ENST00000566230 DNAH12Q6ZR08 3092 aa16.47■□□□□ 0.23
COMMD4-214ENST00000566230 ASNSP08243 561 aa16.46■□□□□ 0.23
COMMD4-214ENST00000566230 COL6A1P12109 1028 aa16.46■□□□□ 0.23
COMMD4-214ENST00000566230 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-214ENST00000566230 Q3C1V9 767 aa16.46■□□□□ 0.23
COMMD4-214ENST00000566230 ADGRA1Q86SQ6 560 aa16.46■□□□□ 0.23
COMMD4-214ENST00000566230 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
COMMD4-214ENST00000566230 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
COMMD4-214ENST00000566230 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
COMMD4-214ENST00000566230 AATFQ9NY61 560 aaKnown RBP eCLIP16.46■□□□□ 0.23
COMMD4-214ENST00000566230 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.23
COMMD4-214ENST00000566230 FRMPD3Q5JV73 1810 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 C19orf81C9J6K1 198 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 UQCRFS1P1P0C7P4 283 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 PPP4CP60510 307 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 CCL14Q16627 93 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 LHX8Q68G74 356 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-214ENST00000566230 MAPKAPK5Q8IW41 473 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 TDHQ8IZJ6 230 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 TGFBRAP1Q8WUH2 860 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 PORCNQ9H237 461 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 MTMR10Q9NXD2 777 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 MAST2Q6P0Q8 1798 aa16.45■□□□□ 0.22
COMMD4-214ENST00000566230 USP17L10C9JJH3 530 aa16.44■□□□□ 0.22
COMMD4-214ENST00000566230 CCND3P30281 292 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-214ENST00000566230 MORN1Q5T089 497 aa16.44■□□□□ 0.22
COMMD4-214ENST00000566230 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-214ENST00000566230 SOCS4Q8WXH5 440 aa16.44■□□□□ 0.22
COMMD4-214ENST00000566230 UBE2OQ9C0C9 1292 aaKnown RBP16.44■□□□□ 0.22
COMMD4-214ENST00000566230 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
COMMD4-214ENST00000566230 PALD1Q9ULE6 856 aa16.44■□□□□ 0.22
COMMD4-214ENST00000566230 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
COMMD4-214ENST00000566230 MYH1P12882 1939 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
COMMD4-214ENST00000566230 GDF11O95390 407 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 BAG3O95817 575 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-214ENST00000566230 MAPK4P31152 587 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 ERVK-9P63128 1117 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 ERVK-24P63145 666 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
COMMD4-214ENST00000566230 LRRC26Q2I0M4 334 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 GPR142Q7Z601 462 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 TRMT44Q8IYL2 757 aaKnown RBP16.43■□□□□ 0.22
COMMD4-214ENST00000566230 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
COMMD4-214ENST00000566230 ZBTB21Q9ULJ3 1066 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 STXBP5LQ9Y2K9 1186 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
COMMD4-214ENST00000566230 FLT1P17948 1338 aa16.43■□□□□ 0.22
COMMD4-214ENST00000566230 PLCG2P16885 1265 aa16.42■□□□□ 0.22
COMMD4-214ENST00000566230 PDE3AQ14432 1141 aa16.42■□□□□ 0.22
COMMD4-214ENST00000566230 PAGR1Q9BTK6 254 aa16.42■□□□□ 0.22
COMMD4-214ENST00000566230 GINM1Q9NU53 330 aa16.42■□□□□ 0.22
COMMD4-214ENST00000566230 SAP30BPQ9UHR5 308 aaKnown RBP16.42■□□□□ 0.22
COMMD4-214ENST00000566230 GNAI2P04899 355 aa16.41■□□□□ 0.22
COMMD4-214ENST00000566230 CYP2E1P05181 493 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-214ENST00000566230 RGS2P41220 211 aa16.41■□□□□ 0.22
COMMD4-214ENST00000566230 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
COMMD4-214ENST00000566230 CRACR2BQ8N4Y2 399 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-214ENST00000566230 DBNDD2Q9BQY9 259 aa16.41■□□□□ 0.22
COMMD4-214ENST00000566230 UNC80Q8N2C7 3258 aa16.41■□□□□ 0.22
COMMD4-214ENST00000566230 CNMDO75829 334 aa16.4■□□□□ 0.22
COMMD4-214ENST00000566230 DYNLL1P63167 89 aaKnown RBP16.4■□□□□ 0.22
COMMD4-214ENST00000566230 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
COMMD4-214ENST00000566230 GPR108Q9NPR9 543 aa16.4■□□□□ 0.22
COMMD4-214ENST00000566230 TRIM27P14373 513 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-214ENST00000566230 MAP2K5Q13163 448 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
COMMD4-214ENST00000566230 GTF3C2Q8WUA4 911 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-214ENST00000566230 APBA2Q99767 749 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 TRIM34Q9BYJ4 488 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 PIH1D3Q9NQM4 214 aaKnown RBP16.39■□□□□ 0.21
COMMD4-214ENST00000566230 FLRT1Q9NZU1 646 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 NDUFB9Q9Y6M9 179 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
COMMD4-214ENST00000566230 BCAR3O75815 825 aa16.38■□□□□ 0.21
COMMD4-214ENST00000566230 GH2P01242 217 aa16.38■□□□□ 0.21
COMMD4-214ENST00000566230 ZAP70P43403 619 aa16.38■□□□□ 0.21
COMMD4-214ENST00000566230 POLA2Q14181 598 aa16.38■□□□□ 0.21
COMMD4-214ENST00000566230 C12orf42Q96LP6 360 aa16.38■□□□□ 0.21
COMMD4-214ENST00000566230 RABGAP1Q9Y3P9 1069 aa16.38■□□□□ 0.21
COMMD4-214ENST00000566230 ZYXQ15942 572 aaKnown RBP16.37■□□□□ 0.21
COMMD4-214ENST00000566230 CCDC158Q5M9N0 1113 aa16.37■□□□□ 0.21
COMMD4-214ENST00000566230 TATDN1Q6P1N9 297 aa16.37■□□□□ 0.21
COMMD4-214ENST00000566230 EDC3Q96F86 508 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms