RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 FOXP4Q8IVH2 680 aaPredicted RBP15.75■□□□□ 0.11
RNF40-208ENST00000565995 GPRC5AQ8NFJ5 357 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 SOCS4Q8WXH5 440 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 NUDT12Q9BQG2 462 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 RBPJLQ9UBG7 517 aa15.75■□□□□ 0.11
RNF40-208ENST00000565995 SMCHD1A6NHR9 2005 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 PRKAR2AP13861 404 aaKnown RBP15.74■□□□□ 0.11
RNF40-208ENST00000565995 SYN1P17600 705 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 CYP2B6P20813 491 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 MAPK4P31152 587 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 HERVK_113P62684 666 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 MORN1Q5T089 497 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 TBC1D9Q6ZT07 1266 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 ARHGAP45Q92619 1136 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 TXNRD2Q9NNW7 524 aa15.74■□□□□ 0.11
RNF40-208ENST00000565995 PARP14Q460N5 1801 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 GNAI3P08754 354 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 MCAMP43121 646 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 IRX3P78415 501 aaPredicted RBP15.73■□□□□ 0.11
RNF40-208ENST00000565995 JAG1P78504 1218 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 CACNB2Q08289 660 aaPredicted RBP15.73■□□□□ 0.11
RNF40-208ENST00000565995 MTMR2Q13614 643 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 Q3C1V9 767 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 FAM109BQ6ICB4 259 aaPredicted RBP15.73■□□□□ 0.11
RNF40-208ENST00000565995 POTEEQ6S8J3 1075 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 PI16Q6UXB8 463 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 Q7L0L9 218 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 TEX11Q8IYF3 940 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 SH3RF3Q8TEJ3 882 aaPredicted RBP15.73■□□□□ 0.11
RNF40-208ENST00000565995 GTF3C2Q8WUA4 911 aaPredicted RBP15.73■□□□□ 0.11
RNF40-208ENST00000565995 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 NEUROD6Q96NK8 337 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 DNAJC18Q9H819 358 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 ZNF236Q9UL36 1845 aa15.73■□□□□ 0.11
RNF40-208ENST00000565995 USP17L10C9JJH3 530 aa15.72■□□□□ 0.11
RNF40-208ENST00000565995 UBE2OQ9C0C9 1292 aaKnown RBP15.72■□□□□ 0.11
RNF40-208ENST00000565995 TMOD4Q9NZQ9 345 aa15.72■□□□□ 0.11
RNF40-208ENST00000565995 RAI14Q9P0K7 980 aa15.72■□□□□ 0.11
RNF40-208ENST00000565995 PRUNE2Q8WUY3 3088 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 VCANP13611 3396 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 BAG3O95817 575 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 UQCRFS1P1P0C7P4 283 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 PLCG2P16885 1265 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 ERVK-9P63128 1117 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 ERVK-24P63145 666 aa15.71■□□□□ 0.11
RNF40-208ENST00000565995 PLXNA1Q9UIW2 1896 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 PEX10O60683 326 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 ZKSCAN1P17029 563 aaPredicted RBP15.7■□□□□ 0.1
RNF40-208ENST00000565995 RGS2P41220 211 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 PDE3AQ14432 1141 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 LRRC26Q2I0M4 334 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 GPR142Q7Z601 462 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 PORCNQ9H237 461 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 EMILIN3Q9NT22 766 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 LRP2BPQ9P2M1 347 aa15.7■□□□□ 0.1
RNF40-208ENST00000565995 IGHA2P01877 340 aa15.69■□□□□ 0.1
RNF40-208ENST00000565995 CCND3P30281 292 aaPredicted RBP15.69■□□□□ 0.1
RNF40-208ENST00000565995 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
RNF40-208ENST00000565995 PLEKHH3Q7Z736 793 aa15.69■□□□□ 0.1
RNF40-208ENST00000565995 C12orf42Q96LP6 360 aa15.69■□□□□ 0.1
RNF40-208ENST00000565995 NOL10Q9BSC4 688 aaKnown RBP15.69■□□□□ 0.1
RNF40-208ENST00000565995 GPR108Q9NPR9 543 aa15.69■□□□□ 0.1
RNF40-208ENST00000565995 ZBTB21Q9ULJ3 1066 aa15.69■□□□□ 0.1
RNF40-208ENST00000565995 FLT1P17948 1338 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 A0A0G2JMZ2 1700 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 COL11A1P12107 1806 aaPredicted RBP15.68■□□□□ 0.1
RNF40-208ENST00000565995 RARSP54136 660 aaKnown RBP15.68■□□□□ 0.1
RNF40-208ENST00000565995 CCL14Q16627 93 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 NAA16Q6N069 864 aaPredicted RBP15.68■□□□□ 0.1
RNF40-208ENST00000565995 USP17L2Q6R6M4 530 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 ADGRA1Q86SQ6 560 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 TGFBRAP1Q8WUH2 860 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 ZNF512BQ96KM6 892 aaPredicted RBP15.68■□□□□ 0.1
RNF40-208ENST00000565995 APBA2Q99767 749 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 AATFQ9NY61 560 aaKnown RBP eCLIP15.68■□□□□ 0.1
RNF40-208ENST00000565995 RABGAP1Q9Y3P9 1069 aa15.68■□□□□ 0.1
RNF40-208ENST00000565995 NAV1Q8NEY1 1877 aa15.67■□□□□ 0.1
RNF40-208ENST00000565995 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
RNF40-208ENST00000565995 CDH23Q9H251 3354 aa15.67■□□□□ 0.1
RNF40-208ENST00000565995 CNMDO75829 334 aa15.67■□□□□ 0.1
RNF40-208ENST00000565995 HOXC6P09630 235 aa15.67■□□□□ 0.1
RNF40-208ENST00000565995 MAP2K5Q13163 448 aa15.67■□□□□ 0.1
RNF40-208ENST00000565995 TATDN1Q6P1N9 297 aa15.67■□□□□ 0.1
RNF40-208ENST00000565995 EDC3Q96F86 508 aaKnown RBP15.67■□□□□ 0.1
RNF40-208ENST00000565995 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
RNF40-208ENST00000565995 CYP2E1P05181 493 aaPredicted RBP15.66■□□□□ 0.1
RNF40-208ENST00000565995 G3BP1Q13283 466 aaKnown RBP eCLIP15.66■□□□□ 0.12e-7■■□□□ 11.4
RNF40-208ENST00000565995 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
RNF40-208ENST00000565995 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
RNF40-208ENST00000565995 MIER1Q8N108 512 aa15.66■□□□□ 0.1
RNF40-208ENST00000565995 CRACR2BQ8N4Y2 399 aaPredicted RBP15.66■□□□□ 0.1
RNF40-208ENST00000565995 PNMA6EA0A0J9YXQ4 647 aa15.65■□□□□ 0.1
RNF40-208ENST00000565995 SLC15A5A6NIM6 579 aa15.65■□□□□ 0.1
RNF40-208ENST00000565995 USP17L15C9J2P7 530 aa15.65■□□□□ 0.1
RNF40-208ENST00000565995 USP17L13C9JLJ4 530 aa15.65■□□□□ 0.1
RNF40-208ENST00000565995 USP17L11C9JVI0 530 aa15.65■□□□□ 0.1
RNF40-208ENST00000565995 USP17L18D6R9N7 530 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms