RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ZBTB21Q9ULJ3 1066 aa23.89■■□□□ 1.41
CMTM3-211ENST00000565922 RNF113AO15541 343 aaKnown RBP23.88■■□□□ 1.41
CMTM3-211ENST00000565922 GDF11O95390 407 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 KIF22Q14807 665 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 GPAT2Q6NUI2 795 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 FBXO46Q6PJ61 603 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-211ENST00000565922 CCDC84Q86UT8 332 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-211ENST00000565922 CD99L2Q8TCZ2 262 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 PUS7LQ9H0K6 701 aaKnown RBP23.88■■□□□ 1.41
CMTM3-211ENST00000565922 PNMA3Q9UL41 463 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 AGTPBP1Q9UPW5 1226 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 TRIM17Q9Y577 477 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 SLC4A4Q9Y6R1 1079 aa23.88■■□□□ 1.41
CMTM3-211ENST00000565922 PLCD1P51178 756 aa23.87■■□□□ 1.41
CMTM3-211ENST00000565922 PABPC4Q13310 644 aaKnown RBP eCLIP23.87■■□□□ 1.41
CMTM3-211ENST00000565922 SLFNL1Q499Z3 407 aa23.87■■□□□ 1.41
CMTM3-211ENST00000565922 CERKLQ49MI3 558 aaPredicted RBP23.87■■□□□ 1.41
CMTM3-211ENST00000565922 FSD1Q9BTV5 496 aa23.87■■□□□ 1.41
CMTM3-211ENST00000565922 CABP5Q9NP86 173 aa23.87■■□□□ 1.41
CMTM3-211ENST00000565922 STAP2Q9UGK3 403 aa23.87■■□□□ 1.41
CMTM3-211ENST00000565922 SWAP70Q9UH65 585 aa23.87■■□□□ 1.41
CMTM3-211ENST00000565922 MGAMO43451 1857 aa23.87■■□□□ 1.41
CMTM3-211ENST00000565922 SH3D19Q5HYK7 790 aa23.86■■□□□ 1.41
CMTM3-211ENST00000565922 OTOP1Q7RTM1 612 aa23.86■■□□□ 1.41
CMTM3-211ENST00000565922 EFCC1Q9HA90 598 aa23.86■■□□□ 1.41
CMTM3-211ENST00000565922 CCDC85CA6NKD9 419 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 C19orf81C9J6K1 198 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 PRKAB2O43741 272 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 CHGBP05060 677 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 GNAT2P19087 354 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 PDE1AP54750 535 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 GABPAQ06546 454 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 C17orf99Q6UX52 265 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 LNPKQ9C0E8 428 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 TMOD4Q9NZQ9 345 aa23.85■■□□□ 1.41
CMTM3-211ENST00000565922 ADGRA2Q96PE1 1338 aa23.84■■□□□ 1.41
CMTM3-211ENST00000565922 USP17L10C9JJH3 530 aa23.84■■□□□ 1.41
CMTM3-211ENST00000565922 GH2P01242 217 aa23.84■■□□□ 1.41
CMTM3-211ENST00000565922 SHMT1P34896 483 aa23.84■■□□□ 1.41
CMTM3-211ENST00000565922 HMGCS2P54868 508 aa23.84■■□□□ 1.41
CMTM3-211ENST00000565922 BACE1P56817 501 aa23.84■■□□□ 1.41
CMTM3-211ENST00000565922 ABCB5Q2M3G0 1257 aa23.84■■□□□ 1.41
CMTM3-211ENST00000565922 SMCR8Q8TEV9 937 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-211ENST00000565922 STRBPQ96SI9 672 aaKnown RBP23.84■■□□□ 1.41
CMTM3-211ENST00000565922 ARPP21Q9UBL0 812 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-211ENST00000565922 GNRH1P01148 92 aa23.83■■□□□ 1.41
CMTM3-211ENST00000565922 LACTBP83111 547 aaPredicted RBP23.83■■□□□ 1.41
CMTM3-211ENST00000565922 MTMR2Q13614 643 aa23.83■■□□□ 1.41
CMTM3-211ENST00000565922 B4GALNT3Q6L9W6 998 aa23.83■■□□□ 1.41
CMTM3-211ENST00000565922 GIMAP6Q6P9H5 292 aa23.83■■□□□ 1.41
CMTM3-211ENST00000565922 CHD1LQ86WJ1 897 aa23.83■■□□□ 1.41
CMTM3-211ENST00000565922 OSBP2Q969R2 916 aa23.83■■□□□ 1.41
CMTM3-211ENST00000565922 EVI5LQ96CN4 794 aa23.83■■□□□ 1.41
CMTM3-211ENST00000565922 GPAA1O43292 621 aa23.82■■□□□ 1.4
CMTM3-211ENST00000565922 IGHDP01880 384 aa23.82■■□□□ 1.4
CMTM3-211ENST00000565922 CYP2C8P10632 490 aa23.82■■□□□ 1.4
CMTM3-211ENST00000565922 C12orf60Q5U649 245 aa23.82■■□□□ 1.4
CMTM3-211ENST00000565922 CPA4Q9UI42 421 aa23.82■■□□□ 1.4
CMTM3-211ENST00000565922 HPS5Q9UPZ3 1129 aa23.82■■□□□ 1.4
CMTM3-211ENST00000565922 ZSWIM8A7E2V4 1837 aa23.82■■□□□ 1.4
CMTM3-211ENST00000565922 USP17L12C9JPN9 530 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 USP17L21D6R901 530 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 OSBPP22059 807 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 JAG1P78504 1218 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 NUCB1Q02818 461 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 RAB3GAP1Q15042 981 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 TICAM2Q86XR7 235 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 FEZ1Q99689 392 aa23.81■■□□□ 1.4
CMTM3-211ENST00000565922 TREML2Q5T2D2 321 aa23.8■■□□□ 1.4
CMTM3-211ENST00000565922 PTPN22Q9Y2R2 807 aa23.8■■□□□ 1.4
CMTM3-211ENST00000565922 MPHOSPH10O00566 681 aaKnown RBP23.79■■□□□ 1.4
CMTM3-211ENST00000565922 CYP2D6P10635 497 aa23.79■■□□□ 1.4
CMTM3-211ENST00000565922 BCRP11274 1271 aa23.79■■□□□ 1.4
CMTM3-211ENST00000565922 USP14P54578 494 aa23.79■■□□□ 1.4
CMTM3-211ENST00000565922 PRMT2P55345 433 aa23.79■■□□□ 1.4
CMTM3-211ENST00000565922 SHROOM1Q2M3G4 852 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-211ENST00000565922 USP17L2Q6R6M4 530 aa23.79■■□□□ 1.4
CMTM3-211ENST00000565922 CCDC17Q96LX7 622 aa23.79■■□□□ 1.4
CMTM3-211ENST00000565922 GCLCP48506 637 aaPredicted RBP23.78■■□□□ 1.4
CMTM3-211ENST00000565922 SBK1Q52WX2 424 aa23.78■■□□□ 1.4
CMTM3-211ENST00000565922 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
CMTM3-211ENST00000565922 CTR9Q6PD62 1173 aa23.78■■□□□ 1.4
CMTM3-211ENST00000565922 TMEM179Q6ZVK1 233 aa23.78■■□□□ 1.4
CMTM3-211ENST00000565922 C16orf86Q6ZW13 317 aa23.78■■□□□ 1.4
CMTM3-211ENST00000565922 NACAP1Q9BZK3 213 aa23.78■■□□□ 1.4
CMTM3-211ENST00000565922 GSG1L2A8MUP6 293 aa23.77■■□□□ 1.4
CMTM3-211ENST00000565922 M0R2C6 588 aa23.77■■□□□ 1.4
CMTM3-211ENST00000565922 HOXD10P28358 340 aa23.77■■□□□ 1.4
CMTM3-211ENST00000565922 TDO2P48775 406 aa23.77■■□□□ 1.4
CMTM3-211ENST00000565922 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
CMTM3-211ENST00000565922 IRX3P78415 501 aaPredicted RBP23.77■■□□□ 1.4
CMTM3-211ENST00000565922 DYNLL2Q96FJ2 89 aa23.77■■□□□ 1.4
CMTM3-211ENST00000565922 APPP05067 770 aa23.76■■□□□ 1.39
CMTM3-211ENST00000565922 HOXA7P31268 230 aaPredicted RBP23.76■■□□□ 1.39
CMTM3-211ENST00000565922 CDK8P49336 464 aa23.76■■□□□ 1.39
CMTM3-211ENST00000565922 SLC44A5Q8NCS7 719 aa23.76■■□□□ 1.39
CMTM3-211ENST00000565922 C12orf42Q96LP6 360 aa23.76■■□□□ 1.39
CMTM3-211ENST00000565922 KIAA1683Q9H0B3 1180 aa23.76■■□□□ 1.39
CMTM3-211ENST00000565922 ASCC2Q9H1I8 757 aaPredicted RBP23.76■■□□□ 1.39
CMTM3-211ENST00000565922 OSBPL3Q9H4L5 887 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms