RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 NACAP1Q9BZK3 213 aa20.45■□□□□ 0.86
CPNE7-207ENST00000564421 PTPRAP18433 802 aa20.44■□□□□ 0.86
CPNE7-207ENST00000564421 RRP1BQ14684 758 aaKnown RBP20.44■□□□□ 0.86
CPNE7-207ENST00000564421 IFNL3Q8IZI9 196 aa20.44■□□□□ 0.86
CPNE7-207ENST00000564421 BEGAINQ9BUH8 593 aa20.44■□□□□ 0.86
CPNE7-207ENST00000564421 EPB41L4AQ9HCS5 686 aaPredicted RBP20.44■□□□□ 0.86
CPNE7-207ENST00000564421 SWAP70Q9UH65 585 aa20.44■□□□□ 0.86
CPNE7-207ENST00000564421 TESPA1A2RU30 521 aaPredicted RBP20.43■□□□□ 0.86
CPNE7-207ENST00000564421 IRF6O14896 467 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 APPP05067 770 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
CPNE7-207ENST00000564421 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
CPNE7-207ENST00000564421 CYP2D6P10635 497 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 TDO2P48775 406 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 GTF2A2P52657 109 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 MS4A4AQ96JQ5 239 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 TBC1D2Q9BYX2 928 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 KCNH4Q9UQ05 1017 aa20.43■□□□□ 0.86
CPNE7-207ENST00000564421 CA12O43570 354 aa20.42■□□□□ 0.86
CPNE7-207ENST00000564421 ASNSP08243 561 aa20.42■□□□□ 0.86
CPNE7-207ENST00000564421 HSPD1P10809 573 aaKnown RBP20.42■□□□□ 0.86
CPNE7-207ENST00000564421 SHMT1P34896 483 aa20.42■□□□□ 0.86
CPNE7-207ENST00000564421 EVX2Q03828 476 aa20.42■□□□□ 0.86
CPNE7-207ENST00000564421 VPS53Q5VIR6 699 aa20.42■□□□□ 0.86
CPNE7-207ENST00000564421 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
CPNE7-207ENST00000564421 LAMA4Q16363 1823 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 PTH1RQ03431 593 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 SNAPC2Q13487 334 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 CERKLQ49MI3 558 aaPredicted RBP20.41■□□□□ 0.86
CPNE7-207ENST00000564421 C16orf86Q6ZW13 317 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 DSCC1Q9BVC3 393 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 NAPBQ9H115 298 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 SAGE1Q9NXZ1 904 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 AFG3L2Q9Y4W6 797 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 ZHX2Q9Y6X8 837 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 ROBO3Q96MS0 1386 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 LOC285556D6RIA3 1793 aa20.41■□□□□ 0.86
CPNE7-207ENST00000564421 GREB1LQ9C091 1923 aaPredicted RBP20.41■□□□□ 0.86
CPNE7-207ENST00000564421 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
CPNE7-207ENST00000564421 CXCL11O14625 94 aa20.4■□□□□ 0.86
CPNE7-207ENST00000564421 FOXP2O15409 715 aa20.4■□□□□ 0.86
CPNE7-207ENST00000564421 ALX1Q15699 326 aa20.4■□□□□ 0.86
CPNE7-207ENST00000564421 ZBTB21Q9ULJ3 1066 aa20.4■□□□□ 0.86
CPNE7-207ENST00000564421 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 CCL15-CCL14A0A0B4J2E2 113 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 USP17L5A8MUK1 530 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 MINDY4BA8MYZ0 360 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 GDF11O95390 407 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 CETPP11597 493 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 CCL15Q16663 113 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 IFNL1Q8IU54 200 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 MAP4K1Q92918 833 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 DYNLL2Q96FJ2 89 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 USP26Q9BXU7 913 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 AS3MTQ9HBK9 375 aa20.39■□□□□ 0.85
CPNE7-207ENST00000564421 ALDH1A1P00352 501 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 CDK8P49336 464 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 JAG1P78504 1218 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 ABCB5Q2M3G0 1257 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 OTUD7BQ6GQQ9 843 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 BRI3BPQ8WY22 251 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 UPF2Q9HAU5 1272 aaKnown RBP20.38■□□□□ 0.85
CPNE7-207ENST00000564421 CABP5Q9NP86 173 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 RNF186Q9NXI6 227 aa20.38■□□□□ 0.85
CPNE7-207ENST00000564421 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.38■□□□□ 0.85
CPNE7-207ENST00000564421 SMIM22K7EJ46 135 aa20.37■□□□□ 0.85
CPNE7-207ENST00000564421 EPB41L2O43491 1005 aaKnown RBP20.37■□□□□ 0.85
CPNE7-207ENST00000564421 GH2P01242 217 aa20.37■□□□□ 0.85
CPNE7-207ENST00000564421 SLC44A5Q8NCS7 719 aa20.37■□□□□ 0.85
CPNE7-207ENST00000564421 ZNF280CQ8ND82 737 aa20.37■□□□□ 0.85
CPNE7-207ENST00000564421 CCDC17Q96LX7 622 aa20.37■□□□□ 0.85
CPNE7-207ENST00000564421 WDR18Q9BV38 432 aa20.37■□□□□ 0.85
CPNE7-207ENST00000564421 ZCCHC17Q9NP64 241 aaKnown RBP20.37■□□□□ 0.85
CPNE7-207ENST00000564421 RBM8AQ9Y5S9 174 aaKnown RBP20.37■□□□□ 0.85
CPNE7-207ENST00000564421 U3KPZ7 1027 aaPredicted RBP20.37■□□□□ 0.85
CPNE7-207ENST00000564421 MYH4Q9Y623 1939 aa20.36■□□□□ 0.85
CPNE7-207ENST00000564421 A0A0G2JLL6 359 aaPredicted RBP20.36■□□□□ 0.85
CPNE7-207ENST00000564421 IGF2BP3O00425 579 aaKnown RBP eCLIP20.36■□□□□ 0.85
CPNE7-207ENST00000564421 FOXN1O15353 648 aa20.36■□□□□ 0.85
CPNE7-207ENST00000564421 FGAP02671 866 aa20.36■□□□□ 0.85
CPNE7-207ENST00000564421 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
CPNE7-207ENST00000564421 PRRT2Q7Z6L0 340 aaPredicted RBP20.36■□□□□ 0.85
CPNE7-207ENST00000564421 PTPN18Q99952 460 aa20.36■□□□□ 0.85
CPNE7-207ENST00000564421 CFHR5Q9BXR6 569 aa20.36■□□□□ 0.85
CPNE7-207ENST00000564421 ZNF287Q9HBT7 754 aa20.36■□□□□ 0.85
CPNE7-207ENST00000564421 CTNNA3Q9UI47 895 aa20.36■□□□□ 0.85
CPNE7-207ENST00000564421 TRPA1O75762 1119 aa20.35■□□□□ 0.85
CPNE7-207ENST00000564421 SLC3A2P08195 630 aaKnown RBP20.35■□□□□ 0.85
CPNE7-207ENST00000564421 PPARAQ07869 468 aa20.35■□□□□ 0.85
CPNE7-207ENST00000564421 SHROOM1Q2M3G4 852 aaPredicted RBP20.35■□□□□ 0.85
CPNE7-207ENST00000564421 CCDC84Q86UT8 332 aaPredicted RBP20.35■□□□□ 0.85
CPNE7-207ENST00000564421 ANAPC4Q9UJX5 808 aa20.35■□□□□ 0.85
CPNE7-207ENST00000564421 CASP8AP2Q9UKL3 1982 aa20.35■□□□□ 0.85
CPNE7-207ENST00000564421 TRIM75PA6NK02 468 aa20.34■□□□□ 0.85
CPNE7-207ENST00000564421 MCCP23508 829 aa20.34■□□□□ 0.85
CPNE7-207ENST00000564421 SPP2Q13103 211 aa20.34■□□□□ 0.85
CPNE7-207ENST00000564421 MOGSQ13724 837 aa20.34■□□□□ 0.85
CPNE7-207ENST00000564421 TMEM179Q6ZVK1 233 aa20.34■□□□□ 0.85
CPNE7-207ENST00000564421 FASTKD5Q7L8L6 764 aaKnown RBP20.34■□□□□ 0.85
CPNE7-207ENST00000564421 HSPA8P11142 646 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms