RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZBTB21Q9ULJ3 1066 aa23.89■■□□□ 1.41
CMTM3-207ENST00000564060 RNF113AO15541 343 aaKnown RBP23.88■■□□□ 1.41
CMTM3-207ENST00000564060 GDF11O95390 407 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 KIF22Q14807 665 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 GPAT2Q6NUI2 795 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 FBXO46Q6PJ61 603 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-207ENST00000564060 CCDC84Q86UT8 332 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-207ENST00000564060 CD99L2Q8TCZ2 262 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 PUS7LQ9H0K6 701 aaKnown RBP23.88■■□□□ 1.41
CMTM3-207ENST00000564060 PNMA3Q9UL41 463 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 AGTPBP1Q9UPW5 1226 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 TRIM17Q9Y577 477 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 SLC4A4Q9Y6R1 1079 aa23.88■■□□□ 1.41
CMTM3-207ENST00000564060 PLCD1P51178 756 aa23.87■■□□□ 1.41
CMTM3-207ENST00000564060 PABPC4Q13310 644 aaKnown RBP eCLIP23.87■■□□□ 1.41
CMTM3-207ENST00000564060 SLFNL1Q499Z3 407 aa23.87■■□□□ 1.41
CMTM3-207ENST00000564060 CERKLQ49MI3 558 aaPredicted RBP23.87■■□□□ 1.41
CMTM3-207ENST00000564060 FSD1Q9BTV5 496 aa23.87■■□□□ 1.41
CMTM3-207ENST00000564060 CABP5Q9NP86 173 aa23.87■■□□□ 1.41
CMTM3-207ENST00000564060 STAP2Q9UGK3 403 aa23.87■■□□□ 1.41
CMTM3-207ENST00000564060 SWAP70Q9UH65 585 aa23.87■■□□□ 1.41
CMTM3-207ENST00000564060 MGAMO43451 1857 aa23.87■■□□□ 1.41
CMTM3-207ENST00000564060 SH3D19Q5HYK7 790 aa23.86■■□□□ 1.41
CMTM3-207ENST00000564060 OTOP1Q7RTM1 612 aa23.86■■□□□ 1.41
CMTM3-207ENST00000564060 EFCC1Q9HA90 598 aa23.86■■□□□ 1.41
CMTM3-207ENST00000564060 CCDC85CA6NKD9 419 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 C19orf81C9J6K1 198 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 PRKAB2O43741 272 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 CHGBP05060 677 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 GNAT2P19087 354 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 PDE1AP54750 535 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 GABPAQ06546 454 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 C17orf99Q6UX52 265 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 LNPKQ9C0E8 428 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 TMOD4Q9NZQ9 345 aa23.85■■□□□ 1.41
CMTM3-207ENST00000564060 ADGRA2Q96PE1 1338 aa23.84■■□□□ 1.41
CMTM3-207ENST00000564060 USP17L10C9JJH3 530 aa23.84■■□□□ 1.41
CMTM3-207ENST00000564060 GH2P01242 217 aa23.84■■□□□ 1.41
CMTM3-207ENST00000564060 SHMT1P34896 483 aa23.84■■□□□ 1.41
CMTM3-207ENST00000564060 HMGCS2P54868 508 aa23.84■■□□□ 1.41
CMTM3-207ENST00000564060 BACE1P56817 501 aa23.84■■□□□ 1.41
CMTM3-207ENST00000564060 ABCB5Q2M3G0 1257 aa23.84■■□□□ 1.41
CMTM3-207ENST00000564060 SMCR8Q8TEV9 937 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-207ENST00000564060 STRBPQ96SI9 672 aaKnown RBP23.84■■□□□ 1.41
CMTM3-207ENST00000564060 ARPP21Q9UBL0 812 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-207ENST00000564060 GNRH1P01148 92 aa23.83■■□□□ 1.41
CMTM3-207ENST00000564060 LACTBP83111 547 aaPredicted RBP23.83■■□□□ 1.41
CMTM3-207ENST00000564060 MTMR2Q13614 643 aa23.83■■□□□ 1.41
CMTM3-207ENST00000564060 B4GALNT3Q6L9W6 998 aa23.83■■□□□ 1.41
CMTM3-207ENST00000564060 GIMAP6Q6P9H5 292 aa23.83■■□□□ 1.41
CMTM3-207ENST00000564060 CHD1LQ86WJ1 897 aa23.83■■□□□ 1.41
CMTM3-207ENST00000564060 OSBP2Q969R2 916 aa23.83■■□□□ 1.41
CMTM3-207ENST00000564060 EVI5LQ96CN4 794 aa23.83■■□□□ 1.41
CMTM3-207ENST00000564060 GPAA1O43292 621 aa23.82■■□□□ 1.4
CMTM3-207ENST00000564060 IGHDP01880 384 aa23.82■■□□□ 1.4
CMTM3-207ENST00000564060 CYP2C8P10632 490 aa23.82■■□□□ 1.4
CMTM3-207ENST00000564060 C12orf60Q5U649 245 aa23.82■■□□□ 1.4
CMTM3-207ENST00000564060 CPA4Q9UI42 421 aa23.82■■□□□ 1.4
CMTM3-207ENST00000564060 HPS5Q9UPZ3 1129 aa23.82■■□□□ 1.4
CMTM3-207ENST00000564060 ZSWIM8A7E2V4 1837 aa23.82■■□□□ 1.4
CMTM3-207ENST00000564060 USP17L12C9JPN9 530 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 USP17L21D6R901 530 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 OSBPP22059 807 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 JAG1P78504 1218 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 NUCB1Q02818 461 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 RAB3GAP1Q15042 981 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 TICAM2Q86XR7 235 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 FEZ1Q99689 392 aa23.81■■□□□ 1.4
CMTM3-207ENST00000564060 TREML2Q5T2D2 321 aa23.8■■□□□ 1.4
CMTM3-207ENST00000564060 PTPN22Q9Y2R2 807 aa23.8■■□□□ 1.4
CMTM3-207ENST00000564060 MPHOSPH10O00566 681 aaKnown RBP23.79■■□□□ 1.4
CMTM3-207ENST00000564060 CYP2D6P10635 497 aa23.79■■□□□ 1.4
CMTM3-207ENST00000564060 BCRP11274 1271 aa23.79■■□□□ 1.4
CMTM3-207ENST00000564060 USP14P54578 494 aa23.79■■□□□ 1.4
CMTM3-207ENST00000564060 PRMT2P55345 433 aa23.79■■□□□ 1.4
CMTM3-207ENST00000564060 SHROOM1Q2M3G4 852 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-207ENST00000564060 USP17L2Q6R6M4 530 aa23.79■■□□□ 1.4
CMTM3-207ENST00000564060 CCDC17Q96LX7 622 aa23.79■■□□□ 1.4
CMTM3-207ENST00000564060 GCLCP48506 637 aaPredicted RBP23.78■■□□□ 1.4
CMTM3-207ENST00000564060 SBK1Q52WX2 424 aa23.78■■□□□ 1.4
CMTM3-207ENST00000564060 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
CMTM3-207ENST00000564060 CTR9Q6PD62 1173 aa23.78■■□□□ 1.4
CMTM3-207ENST00000564060 TMEM179Q6ZVK1 233 aa23.78■■□□□ 1.4
CMTM3-207ENST00000564060 C16orf86Q6ZW13 317 aa23.78■■□□□ 1.4
CMTM3-207ENST00000564060 NACAP1Q9BZK3 213 aa23.78■■□□□ 1.4
CMTM3-207ENST00000564060 GSG1L2A8MUP6 293 aa23.77■■□□□ 1.4
CMTM3-207ENST00000564060 M0R2C6 588 aa23.77■■□□□ 1.4
CMTM3-207ENST00000564060 HOXD10P28358 340 aa23.77■■□□□ 1.4
CMTM3-207ENST00000564060 TDO2P48775 406 aa23.77■■□□□ 1.4
CMTM3-207ENST00000564060 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
CMTM3-207ENST00000564060 IRX3P78415 501 aaPredicted RBP23.77■■□□□ 1.4
CMTM3-207ENST00000564060 DYNLL2Q96FJ2 89 aa23.77■■□□□ 1.4
CMTM3-207ENST00000564060 APPP05067 770 aa23.76■■□□□ 1.39
CMTM3-207ENST00000564060 HOXA7P31268 230 aaPredicted RBP23.76■■□□□ 1.39
CMTM3-207ENST00000564060 CDK8P49336 464 aa23.76■■□□□ 1.39
CMTM3-207ENST00000564060 SLC44A5Q8NCS7 719 aa23.76■■□□□ 1.39
CMTM3-207ENST00000564060 C12orf42Q96LP6 360 aa23.76■■□□□ 1.39
CMTM3-207ENST00000564060 KIAA1683Q9H0B3 1180 aa23.76■■□□□ 1.39
CMTM3-207ENST00000564060 ASCC2Q9H1I8 757 aaPredicted RBP23.76■■□□□ 1.39
CMTM3-207ENST00000564060 OSBPL3Q9H4L5 887 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms