RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 EVX2Q03828 476 aa19.39■□□□□ 0.69
COMMD4-206ENST00000562610 SHROOM1Q2M3G4 852 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-206ENST00000562610 ZNF280CQ8ND82 737 aa19.39■□□□□ 0.69
COMMD4-206ENST00000562610 OSBP2Q969R2 916 aa19.39■□□□□ 0.69
COMMD4-206ENST00000562610 TBC1D2Q9BYX2 928 aa19.39■□□□□ 0.69
COMMD4-206ENST00000562610 MCOLN1Q9GZU1 580 aa19.39■□□□□ 0.69
COMMD4-206ENST00000562610 M0R2C6 588 aa19.38■□□□□ 0.69
COMMD4-206ENST00000562610 CAPN15O75808 1086 aa19.38■□□□□ 0.69
COMMD4-206ENST00000562610 SPP2Q13103 211 aa19.38■□□□□ 0.69
COMMD4-206ENST00000562610 MOGSQ13724 837 aa19.38■□□□□ 0.69
COMMD4-206ENST00000562610 IFFO2Q5TF58 517 aa19.38■□□□□ 0.69
COMMD4-206ENST00000562610 FASTKD5Q7L8L6 764 aaKnown RBP19.38■□□□□ 0.69
COMMD4-206ENST00000562610 CTU1Q7Z7A3 348 aaKnown RBP19.38■□□□□ 0.69
COMMD4-206ENST00000562610 GPAA1O43292 621 aa19.37■□□□□ 0.69
COMMD4-206ENST00000562610 GH2P01242 217 aa19.37■□□□□ 0.69
COMMD4-206ENST00000562610 JAG1P78504 1218 aa19.37■□□□□ 0.69
COMMD4-206ENST00000562610 TATDN1Q6P1N9 297 aa19.37■□□□□ 0.69
COMMD4-206ENST00000562610 EVI5LQ96CN4 794 aa19.37■□□□□ 0.69
COMMD4-206ENST00000562610 STRBPQ96SI9 672 aaKnown RBP19.37■□□□□ 0.69
COMMD4-206ENST00000562610 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
COMMD4-206ENST00000562610 SHMT1P34896 483 aa19.36■□□□□ 0.69
COMMD4-206ENST00000562610 CERKLQ49MI3 558 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-206ENST00000562610 CD99L2Q8TCZ2 262 aa19.36■□□□□ 0.69
COMMD4-206ENST00000562610 ABHD8Q96I13 439 aa19.36■□□□□ 0.69
COMMD4-206ENST00000562610 PARK7Q99497 189 aaKnown RBP19.36■□□□□ 0.69
COMMD4-206ENST00000562610 GINM1Q9NU53 330 aa19.36■□□□□ 0.69
COMMD4-206ENST00000562610 TRIM6-TRIM34B2RNG4 842 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 USP17L12C9JPN9 530 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 USP17L21D6R901 530 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 TLR2O60603 784 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 HMGCS2P54868 508 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 SP3Q02447 781 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 GABPAQ06546 454 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 MTMR2Q13614 643 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 RAB3GAP1Q15042 981 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 ABCB5Q2M3G0 1257 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 GPAT2Q6NUI2 795 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 ERO1AQ96HE7 468 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 SEC62Q99442 399 aaKnown RBP19.35■□□□□ 0.69
COMMD4-206ENST00000562610 ARPP21Q9UBL0 812 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-206ENST00000562610 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
COMMD4-206ENST00000562610 MYH4Q9Y623 1939 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 MPHOSPH10O00566 681 aaKnown RBP19.34■□□□□ 0.69
COMMD4-206ENST00000562610 APPP05067 770 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 GNAT2P19087 354 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 TDO2P48775 406 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 ZMYM1Q5SVZ6 1142 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 PLEKHM2Q8IWE5 1019 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 SLC44A5Q8NCS7 719 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 DYNLL2Q96FJ2 89 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 CABP5Q9NP86 173 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 AGTPBP1Q9UPW5 1226 aa19.34■□□□□ 0.69
COMMD4-206ENST00000562610 GREB1LQ9C091 1923 aaPredicted RBP19.33■□□□□ 0.69
COMMD4-206ENST00000562610 GSG1L2A8MUP6 293 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 CYP2C8P10632 490 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 TREML2Q5T2D2 321 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 C12orf60Q5U649 245 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 PROCA1Q8NCQ7 364 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-206ENST00000562610 RILPL2Q969X0 211 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 FEZ1Q99689 392 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 WDR18Q9BV38 432 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 CPA4Q9UI42 421 aa19.33■□□□□ 0.68
COMMD4-206ENST00000562610 SMIM22K7EJ46 135 aa19.32■□□□□ 0.68
COMMD4-206ENST00000562610 BACE1P56817 501 aa19.32■□□□□ 0.68
COMMD4-206ENST00000562610 CTR9Q6PD62 1173 aa19.32■□□□□ 0.68
COMMD4-206ENST00000562610 SMCR8Q8TEV9 937 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-206ENST00000562610 EPB41L4AQ9HCS5 686 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-206ENST00000562610 TMOD4Q9NZQ9 345 aa19.32■□□□□ 0.68
COMMD4-206ENST00000562610 SLC45A1Q9Y2W3 748 aa19.32■□□□□ 0.68
COMMD4-206ENST00000562610 TRIM17Q9Y577 477 aa19.32■□□□□ 0.68
COMMD4-206ENST00000562610 ADGRA2Q96PE1 1338 aa19.31■□□□□ 0.68
COMMD4-206ENST00000562610 USP17L10C9JJH3 530 aa19.31■□□□□ 0.68
COMMD4-206ENST00000562610 ECM2O94769 699 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-206ENST00000562610 ZYXQ15942 572 aaKnown RBP19.31■□□□□ 0.68
COMMD4-206ENST00000562610 GIMAP6Q6P9H5 292 aa19.31■□□□□ 0.68
COMMD4-206ENST00000562610 CCDC129Q6ZRS4 1044 aa19.31■□□□□ 0.68
COMMD4-206ENST00000562610 OSBPL3Q9H4L5 887 aa19.31■□□□□ 0.68
COMMD4-206ENST00000562610 PNMA3Q9UL41 463 aa19.31■□□□□ 0.68
COMMD4-206ENST00000562610 TAOK2Q9UL54 1235 aa19.31■□□□□ 0.68
COMMD4-206ENST00000562610 LAMA4Q16363 1823 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 MINDY4BA8MYZ0 360 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 PABPC4Q13310 644 aaKnown RBP eCLIP19.3■□□□□ 0.681e-6■■□□□ 13.1
COMMD4-206ENST00000562610 SEPT2Q15019 361 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 PKN2Q16513 984 aaKnown RBP19.3■□□□□ 0.68
COMMD4-206ENST00000562610 SH3D19Q5HYK7 790 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 C16orf86Q6ZW13 317 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 OTOP1Q7RTM1 612 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 STK11IPQ8N1F8 1099 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 NACAP1Q9BZK3 213 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 ROBO3Q96MS0 1386 aa19.3■□□□□ 0.68
COMMD4-206ENST00000562610 C19orf81C9J6K1 198 aa19.29■□□□□ 0.68
COMMD4-206ENST00000562610 CDK8P49336 464 aa19.29■□□□□ 0.68
COMMD4-206ENST00000562610 KIF22Q14807 665 aa19.29■□□□□ 0.68
COMMD4-206ENST00000562610 C17orf99Q6UX52 265 aa19.29■□□□□ 0.68
COMMD4-206ENST00000562610 NAPBQ9H115 298 aa19.29■□□□□ 0.68
COMMD4-206ENST00000562610 EFCC1Q9HA90 598 aa19.29■□□□□ 0.68
COMMD4-206ENST00000562610 PARP14Q460N5 1801 aa19.29■□□□□ 0.68
COMMD4-206ENST00000562610 CCDC85CA6NKD9 419 aa19.28■□□□□ 0.68
COMMD4-206ENST00000562610 PATL2C9JE40 543 aaKnown RBP19.28■□□□□ 0.68
COMMD4-206ENST00000562610 AKR1B1P15121 316 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms