RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 CABP5Q9NP86 173 aa10.82□□□□□ -0.68
SNRPA1-214ENST00000560987 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
SNRPA1-214ENST00000560987 RFX7Q2KHR2 1363 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 TRIM75PA6NK02 468 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 M0R2C6 588 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 MPHOSPH10O00566 681 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 GDF11O95390 407 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 CYP2D6P10635 497 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 GNAT2P19087 354 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 TDO2P48775 406 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 MKRN4PQ13434 485 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 CCDC84Q86UT8 332 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 MS4A4AQ96JQ5 239 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 NACAP1Q9BZK3 213 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 MCOLN1Q9GZU1 580 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 AS3MTQ9HBK9 375 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 MYH1P12882 1939 aa10.81□□□□□ -0.68
SNRPA1-214ENST00000560987 CYP2D7A0A087X1C5 515 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 GSG1L2A8MUP6 293 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 IGF2BP3O00425 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 CXCL11O14625 94 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 ASNSP08243 561 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 SPP2Q13103 211 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 RRP1BQ14684 758 aaKnown RBP10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 RAB3GAP1Q15042 981 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 ZMYM1Q5SVZ6 1142 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 CCDC129Q6ZRS4 1044 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 DYNLL2Q96FJ2 89 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 PTPN18Q99952 460 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 ZFYVE28Q9HCC9 887 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 AFG3L2Q9Y4W6 797 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 MYH7P12883 1935 aa10.8□□□□□ -0.68
SNRPA1-214ENST00000560987 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 GH2P01242 217 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 SDSP20132 328 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 PDE4AP27815 886 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 MLLT1Q03111 559 aaPredicted RBP10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 TAF1CQ15572 869 aaPredicted RBP10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 ABCB5Q2M3G0 1257 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 MCMDC2Q4G0Z9 681 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 C12orf60Q5U649 245 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 CTR9Q6PD62 1173 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 CENPQQ7L2Z9 268 aaPredicted RBP10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 FASTKD5Q7L8L6 764 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 METTL16Q86W50 562 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 IFNL3Q8IZI9 196 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 ZNF280CQ8ND82 737 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 EHD4Q9H223 541 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 MKNK2Q9HBH9 465 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 DIAPH3Q9NSV4 1193 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 PCDH10Q9P2E7 1040 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 SWAP70Q9UH65 585 aa10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 COL2A1P02458 1487 aaPredicted RBP10.79□□□□□ -0.68
SNRPA1-214ENST00000560987 CDK5RAP2Q96SN8 1893 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 THSD7BQ9C0I4 1608 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 BTBD19C9JJ37 291 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 GPR25O00155 361 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 HIP1O00291 1037 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 PDHXO00330 501 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 CDK8P49336 464 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 MFAP1P55081 439 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 PKN2Q16513 984 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 GIMAP6Q6P9H5 292 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 ZNF444Q8N0Y2 327 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 FAM43AQ8N2R8 423 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 FAM227BQ96M60 508 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 TBC1D2Q9BYX2 928 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 NAPBQ9H115 298 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 DNAJC18Q9H819 358 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 TMOD4Q9NZQ9 345 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 ARPP21Q9UBL0 812 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
SNRPA1-214ENST00000560987 OTOFQ9HC10 1997 aa10.77□□□□□ -0.68
SNRPA1-214ENST00000560987 FKTNO75072 461 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 JAG1P78504 1218 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 CRHR2Q13324 411 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 SBK1Q52WX2 424 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 TTC22Q5TAA0 569 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 CWC27Q6UX04 472 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 CTU1Q7Z7A3 348 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 TICAM2Q86XR7 235 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 SLC44A5Q8NCS7 719 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 FEZ1Q99689 392 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 R3HDMLQ9H3Y0 253 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 ZNF287Q9HBT7 754 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 GINM1Q9NU53 330 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 ZBTB21Q9ULJ3 1066 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 FOCADQ5VW36 1801 aa10.77□□□□□ -0.69
SNRPA1-214ENST00000560987 A0A0G2JLL6 359 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-214ENST00000560987 C19orf81C9J6K1 198 aa10.76□□□□□ -0.69
SNRPA1-214ENST00000560987 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms