RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CYP2D7A0A087X1C5 515 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 ASNSP08243 561 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 BCRP11274 1271 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 OSBPP22059 807 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 RAB3GAP1Q15042 981 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 ARHGEF6Q15052 776 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 TTC6Q86TZ1 520 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
SMAD3-208ENST00000558827 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 SLC44A5Q8NCS7 719 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 DYNLL2Q96FJ2 89 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
SMAD3-208ENST00000558827 IGSF3O75054 1194 aa15.12■□□□□ 0.01
SMAD3-208ENST00000558827 CERKLQ49MI3 558 aaPredicted RBP15.12■□□□□ 0.01
SMAD3-208ENST00000558827 SLC9C1Q4G0N8 1177 aa15.12■□□□□ 0.01
SMAD3-208ENST00000558827 STK11IPQ8N1F8 1099 aa15.12■□□□□ 0.01
SMAD3-208ENST00000558827 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMAD3-208ENST00000558827 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
SMAD3-208ENST00000558827 GABRQQ9UN88 632 aa15.12■□□□□ 0.01
SMAD3-208ENST00000558827 MPHOSPH10O00566 681 aaKnown RBP15.11■□□□□ 0.01
SMAD3-208ENST00000558827 SHMT1P34896 483 aa15.11■□□□□ 0.01
SMAD3-208ENST00000558827 BACE1P56817 501 aa15.11■□□□□ 0.01
SMAD3-208ENST00000558827 ANKRD45Q5TZF3 282 aa15.11■□□□□ 0.01
SMAD3-208ENST00000558827 ACER1Q8TDN7 264 aa15.11■□□□□ 0.01
SMAD3-208ENST00000558827 WDR18Q9BV38 432 aa15.11■□□□□ 0.01
SMAD3-208ENST00000558827 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-208ENST00000558827 DCP1AQ9NPI6 582 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-208ENST00000558827 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
SMAD3-208ENST00000558827 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
SMAD3-208ENST00000558827 BAZ2AQ9UIF9 1905 aaKnown RBP15.1■□□□□ 0.01
SMAD3-208ENST00000558827 HTTP42858 3142 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 USP17L10C9JJH3 530 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 EN2P19622 333 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-208ENST00000558827 PRKCZQ05513 592 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 ABCB5Q2M3G0 1257 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 TATDN1Q6P1N9 297 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 CERS3Q8IU89 383 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 PROCA1Q8NCQ7 364 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-208ENST00000558827 RAET1EQ8TD07 263 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 GPATCH3Q96I76 525 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
SMAD3-208ENST00000558827 FEZ1Q99689 392 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 SRRDQ9UH36 339 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 SLC4A4Q9Y6R1 1079 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 DOCK3Q8IZD9 2030 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 MYPNQ86TC9 1320 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 NAV1Q8NEY1 1877 aa15.1■□□□□ 0.01
SMAD3-208ENST00000558827 PDE4DIPQ5VU43 2346 aa15.09■□□□□ 0.01
SMAD3-208ENST00000558827 FCGRTP55899 365 aa15.09■□□□□ 0.01
SMAD3-208ENST00000558827 SEPT2Q15019 361 aa15.09■□□□□ 0.01
SMAD3-208ENST00000558827 SH3D19Q5HYK7 790 aa15.09■□□□□ 0.01
SMAD3-208ENST00000558827 ARMC5Q96C12 935 aa15.09■□□□□ 0.01
SMAD3-208ENST00000558827 EMILIN3Q9NT22 766 aa15.09■□□□□ 0.01
SMAD3-208ENST00000558827 BIN2Q9UBW5 565 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-208ENST00000558827 MYH7P12883 1935 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 USP17L12C9JPN9 530 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 USP17L21D6R901 530 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 GUCY1A2P33402 732 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
SMAD3-208ENST00000558827 UBE3CQ15386 1083 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 MTFR1Q15390 333 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 CLEC10AQ8IUN9 316 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 EXOC6Q8TAG9 804 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 ZNF333Q96JL9 665 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 EHD4Q9H223 541 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 CABP5Q9NP86 173 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 PNMA3Q9UL41 463 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 SLC45A1Q9Y2W3 748 aa15.08■□□□□ 0
SMAD3-208ENST00000558827 TNPO2O14787 897 aaKnown RBP15.07■□□□□ 0
SMAD3-208ENST00000558827 ELNP15502 786 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 HOXD10P28358 340 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 GABPAQ06546 454 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
SMAD3-208ENST00000558827 B4GALNT3Q6L9W6 998 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 TMED8Q6PL24 325 aaPredicted RBP15.07■□□□□ 0
SMAD3-208ENST00000558827 USP17L2Q6R6M4 530 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 NBPF11Q86T75 865 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 KBTBD3Q8NAB2 608 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 OSBP2Q969R2 916 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 PAGR1Q9BTK6 254 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 TMEM106CQ9BVX2 250 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 TBC1D2Q9BYX2 928 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
SMAD3-208ENST00000558827 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
SMAD3-208ENST00000558827 MGAMO43451 1857 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 CENPFP49454 3210 aa15.07■□□□□ 0
SMAD3-208ENST00000558827 TNRC18O15417 2968 aaPredicted RBP15.06■□□□□ 0
SMAD3-208ENST00000558827 C19orf81C9J6K1 198 aa15.06■□□□□ 0
SMAD3-208ENST00000558827 M0R2C6 588 aa15.06■□□□□ 0
SMAD3-208ENST00000558827 RNF113AO15541 343 aaKnown RBP15.06■□□□□ 0
SMAD3-208ENST00000558827 AKR1B1P15121 316 aa15.06■□□□□ 0
SMAD3-208ENST00000558827 FLT3LGP49771 235 aa15.06■□□□□ 0
SMAD3-208ENST00000558827 IRX6P78412 446 aaPredicted RBP15.06■□□□□ 0
SMAD3-208ENST00000558827 PI4K2BQ8TCG2 481 aa15.06■□□□□ 0
SMAD3-208ENST00000558827 STRBPQ96SI9 672 aaKnown RBP15.06■□□□□ 0
SMAD3-208ENST00000558827 SEC62Q99442 399 aaKnown RBP15.06■□□□□ 0
SMAD3-208ENST00000558827 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms