RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 IFIT1P09914 478 aaKnown RBP12.59□□□□□ -0.39
ABCD4-227ENST00000557554 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
ABCD4-227ENST00000557554 ERVK-9P63128 1117 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 ERVK-24P63145 666 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
ABCD4-227ENST00000557554 ADGRE1Q14246 886 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 PUM3Q15397 648 aaKnown RBP12.59□□□□□ -0.39
ABCD4-227ENST00000557554 GJC2Q5T442 439 aaPredicted RBP12.59□□□□□ -0.39
ABCD4-227ENST00000557554 PLEKHH3Q7Z736 793 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 EDC3Q96F86 508 aaKnown RBP12.59□□□□□ -0.39
ABCD4-227ENST00000557554 WDR18Q9BV38 432 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 MUC6Q6W4X9 2439 aa12.59□□□□□ -0.39
ABCD4-227ENST00000557554 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
ABCD4-227ENST00000557554 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 HOXC6P09630 235 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 BACE1P56817 501 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 MFSD14CQ5VZR4 134 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 ARRDC4Q8NCT1 418 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 KLHDC4Q8TBB5 520 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 SNX27Q96L92 541 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 EPHX3Q9H6B9 360 aa12.58□□□□□ -0.4
ABCD4-227ENST00000557554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.58□□□□□ -0.4
ABCD4-227ENST00000557554 KIAA0355O15063 1070 aa12.57□□□□□ -0.4
ABCD4-227ENST00000557554 ZBTB22O15209 634 aa12.57□□□□□ -0.4
ABCD4-227ENST00000557554 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
ABCD4-227ENST00000557554 JAG1P78504 1218 aa12.57□□□□□ -0.4
ABCD4-227ENST00000557554 TIFAQ96CG3 184 aa12.57□□□□□ -0.4
ABCD4-227ENST00000557554 BICC1Q9H694 974 aaKnown RBP12.57□□□□□ -0.4
ABCD4-227ENST00000557554 TACC3Q9Y6A5 838 aa12.57□□□□□ -0.4
ABCD4-227ENST00000557554 CYBAP13498 195 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 CNGA1P29973 690 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 CYP2C19P33261 490 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
ABCD4-227ENST00000557554 RHBDL3P58872 404 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 TLE2Q04725 743 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 PICALMQ13492 652 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 MTMR2Q13614 643 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 ALYREFQ86V81 257 aaKnown RBP12.56□□□□□ -0.4
ABCD4-227ENST00000557554 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 LPIN2Q92539 896 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 GAS2L1Q99501 681 aaPredicted RBP12.56□□□□□ -0.4
ABCD4-227ENST00000557554 PRDM12Q9H4Q4 367 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 C11orf16Q9NQ32 467 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 HCN4Q9Y3Q4 1203 aa12.56□□□□□ -0.4
ABCD4-227ENST00000557554 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 CNMDO75829 334 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 PTPREP23469 700 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 PBX2P40425 430 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 ADCYAP1R1P41586 468 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 CCDC85BQ15834 202 aaPredicted RBP12.55□□□□□ -0.4
ABCD4-227ENST00000557554 CXXC1Q9P0U4 656 aaPredicted RBP12.55□□□□□ -0.4
ABCD4-227ENST00000557554 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
ABCD4-227ENST00000557554 GPR75-ASB3A0A0A6YYF3 556 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 SLC15A5A6NIM6 579 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 SLC5A1P13866 664 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 ATP2B2Q01814 1243 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 RASIP1Q5U651 963 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 ZNF384Q8TF68 577 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 AS3MTQ9HBK9 375 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 TMOD4Q9NZQ9 345 aa12.54□□□□□ -0.4
ABCD4-227ENST00000557554 GRXCR1A8MXD5 290 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 KBTBD13C9JR72 458 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 SEMA3EO15041 775 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 GPR37L1O60883 481 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 CLTBP09497 229 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 BTDP43251 543 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 RFX5P48382 616 aaPredicted RBP12.53□□□□□ -0.4
ABCD4-227ENST00000557554 FPGSQ05932 587 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 GRB14Q14449 540 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 LRRC41Q15345 812 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 CCAR1Q8IX12 1150 aaKnown RBP12.53□□□□□ -0.4
ABCD4-227ENST00000557554 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
ABCD4-227ENST00000557554 FERMT2Q96AC1 680 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 SRCIN1Q9C0H9 1055 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 EMILIN3Q9NT22 766 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 DENND2AQ9ULE3 1009 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 SMCHD1A6NHR9 2005 aa12.53□□□□□ -0.4
ABCD4-227ENST00000557554 USP17L10C9JJH3 530 aa12.52□□□□□ -0.41
ABCD4-227ENST00000557554 EYA2O00167 538 aa12.52□□□□□ -0.41
ABCD4-227ENST00000557554 SEPT4O43236 478 aa12.52□□□□□ -0.41
ABCD4-227ENST00000557554 TFF2Q03403 129 aa12.52□□□□□ -0.41
ABCD4-227ENST00000557554 TMEM31Q5JXX7 168 aa12.52□□□□□ -0.41
ABCD4-227ENST00000557554 ANO1Q5XXA6 986 aa12.52□□□□□ -0.41
ABCD4-227ENST00000557554 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.413e-7■□□□□ 11.3
ABCD4-227ENST00000557554 GLRX3O76003 335 aaKnown RBP12.51□□□□□ -0.41
ABCD4-227ENST00000557554 RAG1P15918 1043 aa12.51□□□□□ -0.41
ABCD4-227ENST00000557554 PHKA1P46020 1223 aa12.51□□□□□ -0.41
ABCD4-227ENST00000557554 FAAP100Q0VG06 881 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms