RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 GTF3C2Q8WUA4 911 aaPredicted RBP14.62□□□□□ -0.07
ACTN1-221ENST00000556571 UBE2OQ9C0C9 1292 aaKnown RBP14.62□□□□□ -0.07
ACTN1-221ENST00000556571 TXNRD2Q9NNW7 524 aa14.62□□□□□ -0.07
ACTN1-221ENST00000556571 STXBP5LQ9Y2K9 1186 aa14.62□□□□□ -0.07
ACTN1-221ENST00000556571 ALPK3Q96L96 1907 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 LOC285556D6RIA3 1793 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 USP17L10C9JJH3 530 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 ZKSCAN1P17029 563 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-221ENST00000556571 MCAMP43121 646 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 PPP4CP60510 307 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 CACNB2Q08289 660 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-221ENST00000556571 G3BP1Q13283 466 aaKnown RBP eCLIP14.61□□□□□ -0.075e-10■■□□□ 12.9
ACTN1-221ENST00000556571 NAA16Q6N069 864 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-221ENST00000556571 METTL16Q86W50 562 aaKnown RBP14.61□□□□□ -0.07
ACTN1-221ENST00000556571 USP6NLQ92738 828 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 TRIM34Q9BYJ4 488 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 AATFQ9NY61 560 aaKnown RBP eCLIP14.61□□□□□ -0.07
ACTN1-221ENST00000556571 RBPJLQ9UBG7 517 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 PFASO15067 1338 aa14.61□□□□□ -0.07
ACTN1-221ENST00000556571 COL6A1P12109 1028 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 RGS2P41220 211 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 ERVK-9P63128 1117 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 ERVK-24P63145 666 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 JAG1P78504 1218 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 Q3C1V9 767 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 Q7L0L9 218 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 MAPKAPK5Q8IW41 473 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 CRACR2BQ8N4Y2 399 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-221ENST00000556571 TGFBRAP1Q8WUH2 860 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 MTMR10Q9NXD2 777 aa14.6□□□□□ -0.07
ACTN1-221ENST00000556571 PEX10O60683 326 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 IGSF3O75054 1194 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 GNAI2P04899 355 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 RARSP54136 660 aaKnown RBP14.59□□□□□ -0.07
ACTN1-221ENST00000556571 MORN1Q5T089 497 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 LHX8Q68G74 356 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 ATF7IPQ6VMQ6 1270 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 PLEKHH3Q7Z736 793 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 DNAJC18Q9H819 358 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
ACTN1-221ENST00000556571 GDF11O95390 407 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 CCND3P30281 292 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-221ENST00000556571 CCDC158Q5M9N0 1113 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L2Q6R6M4 530 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 APBA2Q99767 749 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 PORCNQ9H237 461 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 SNRKQ9NRH2 765 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 EMILIN3Q9NT22 766 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 PALD1Q9ULE6 856 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 FLT1P17948 1338 aa14.58□□□□□ -0.08
ACTN1-221ENST00000556571 IPO8O15397 1037 aaKnown RBP14.57□□□□□ -0.08
ACTN1-221ENST00000556571 GLRX3O76003 335 aaKnown RBP14.57□□□□□ -0.08
ACTN1-221ENST00000556571 HLA-DOAP06340 250 aa14.57□□□□□ -0.08
ACTN1-221ENST00000556571 CCL14Q16627 93 aa14.57□□□□□ -0.08
ACTN1-221ENST00000556571 LRRC26Q2I0M4 334 aa14.57□□□□□ -0.08
ACTN1-221ENST00000556571 TTC39AQ5SRH9 613 aa14.57□□□□□ -0.08
ACTN1-221ENST00000556571 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
ACTN1-221ENST00000556571 GPR108Q9NPR9 543 aa14.57□□□□□ -0.08
ACTN1-221ENST00000556571 RABGAP1Q9Y3P9 1069 aa14.57□□□□□ -0.08
ACTN1-221ENST00000556571 DDX60LQ5H9U9 1706 aaKnown RBP14.56□□□□□ -0.08
ACTN1-221ENST00000556571 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
ACTN1-221ENST00000556571 CCNA1P78396 465 aa14.56□□□□□ -0.08
ACTN1-221ENST00000556571 MAP2K5Q13163 448 aa14.56□□□□□ -0.08
ACTN1-221ENST00000556571 SHROOM1Q2M3G4 852 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-221ENST00000556571 MFSD14CQ5VZR4 134 aa14.56□□□□□ -0.08
ACTN1-221ENST00000556571 POTEEQ6S8J3 1075 aa14.56□□□□□ -0.08
ACTN1-221ENST00000556571 ADGRA1Q86SQ6 560 aa14.56□□□□□ -0.08
ACTN1-221ENST00000556571 EDC3Q96F86 508 aaKnown RBP14.56□□□□□ -0.08
ACTN1-221ENST00000556571 PLXNB2O15031 1838 aa14.56□□□□□ -0.08
ACTN1-221ENST00000556571 ATAD5Q96QE3 1844 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L15C9J2P7 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L13C9JLJ4 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L11C9JVI0 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L18D6R9N7 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L22D6RA61 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L17D6RBQ6 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L19D6RCP7 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L20D6RJB6 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 CYP2E1P05181 493 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-221ENST00000556571 MDM2Q00987 491 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-221ENST00000556571 USP17L24Q0WX57 530 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 TNNI3KQ59H18 835 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 FAM109BQ6ICB4 259 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-221ENST00000556571 ZNF512BQ96KM6 892 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-221ENST00000556571 C12orf42Q96LP6 360 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
ACTN1-221ENST00000556571 FPGT-TNNI3KV9GXZ4 949 aa14.55□□□□□ -0.08
ACTN1-221ENST00000556571 SLC15A5A6NIM6 579 aa14.54□□□□□ -0.08
ACTN1-221ENST00000556571 GH2P01242 217 aa14.54□□□□□ -0.08
ACTN1-221ENST00000556571 USP14P54578 494 aa14.54□□□□□ -0.08
ACTN1-221ENST00000556571 CERS3Q8IU89 383 aa14.54□□□□□ -0.08
ACTN1-221ENST00000556571 FEZ1Q99689 392 aa14.54□□□□□ -0.08
ACTN1-221ENST00000556571 LBHD1Q9BQE6 289 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-221ENST00000556571 DBNDD2Q9BQY9 259 aa14.54□□□□□ -0.08
ACTN1-221ENST00000556571 SENP6Q9GZR1 1112 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-221ENST00000556571 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
ACTN1-221ENST00000556571 MSCO60682 206 aa14.53□□□□□ -0.08
ACTN1-221ENST00000556571 CNMDO75829 334 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms