RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 GADL1Q6ZQY3 521 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 PROCA1Q8NCQ7 364 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-211ENST00000554310 EXOC6Q8TAG9 804 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 CD99L2Q8TCZ2 262 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 DDRGK1Q96HY6 314 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 WDR18Q9BV38 432 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 ATP8A2Q9NTI2 1148 aa15.73■□□□□ 0.11
SHMT2-211ENST00000554310 GDF11O95390 407 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 CHGBP05060 677 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 SPP2Q13103 211 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 ARHGEF6Q15052 776 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 SLFNL1Q499Z3 407 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 OTOP1Q7RTM1 612 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 APPBP2Q92624 585 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 AGTPBP1Q9UPW5 1226 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 TRIM17Q9Y577 477 aa15.72■□□□□ 0.11
SHMT2-211ENST00000554310 CCDC85CA6NKD9 419 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
SHMT2-211ENST00000554310 PLCD1P51178 756 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 GABPAQ06546 454 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 SH3D19Q5HYK7 790 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 C17orf99Q6UX52 265 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 AMOTL1Q8IY63 956 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 PUS7LQ9H0K6 701 aaKnown RBP15.71■□□□□ 0.11
SHMT2-211ENST00000554310 PNMA3Q9UL41 463 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 HPS5Q9UPZ3 1129 aa15.71■□□□□ 0.11
SHMT2-211ENST00000554310 PRKAB2O43741 272 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 SHMT1P34896 483 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 HMGCS2P54868 508 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 BACE1P56817 501 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 JAG1P78504 1218 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-211ENST00000554310 MTMR2Q13614 643 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 KIF22Q14807 665 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 EFCC1Q9HA90 598 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 STAP2Q9UGK3 403 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 SWAP70Q9UH65 585 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 SLC4A4Q9Y6R1 1079 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 ZSWIM8A7E2V4 1837 aa15.7■□□□□ 0.1
SHMT2-211ENST00000554310 C19orf81C9J6K1 198 aa15.69■□□□□ 0.1
SHMT2-211ENST00000554310 GH2P01242 217 aa15.69■□□□□ 0.1
SHMT2-211ENST00000554310 CYP2C8P10632 490 aa15.69■□□□□ 0.1
SHMT2-211ENST00000554310 PABPC4Q13310 644 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHMT2-211ENST00000554310 ABCB5Q2M3G0 1257 aa15.69■□□□□ 0.1
SHMT2-211ENST00000554310 SHROOM1Q2M3G4 852 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-211ENST00000554310 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-211ENST00000554310 TREML2Q5T2D2 321 aa15.69■□□□□ 0.1
SHMT2-211ENST00000554310 ARPP21Q9UBL0 812 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-211ENST00000554310 CPA4Q9UI42 421 aa15.69■□□□□ 0.1
SHMT2-211ENST00000554310 MGAMO43451 1857 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 USP17L10C9JJH3 530 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 GNRH1P01148 92 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 CYP2D6P10635 497 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 BCRP11274 1271 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 GNAT2P19087 354 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 PDE1AP54750 535 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 SMCR8Q8TEV9 937 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-211ENST00000554310 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 STRBPQ96SI9 672 aaKnown RBP15.68■□□□□ 0.1
SHMT2-211ENST00000554310 LNPKQ9C0E8 428 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 CABP5Q9NP86 173 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 TMOD4Q9NZQ9 345 aa15.68■□□□□ 0.1
SHMT2-211ENST00000554310 GPAA1O43292 621 aa15.67■□□□□ 0.1
SHMT2-211ENST00000554310 CAP1Q01518 475 aa15.67■□□□□ 0.1
SHMT2-211ENST00000554310 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
SHMT2-211ENST00000554310 GIMAP6Q6P9H5 292 aa15.67■□□□□ 0.1
SHMT2-211ENST00000554310 PTPN22Q9Y2R2 807 aa15.67■□□□□ 0.1
SHMT2-211ENST00000554310 HTTP42858 3142 aa15.67■□□□□ 0.1
SHMT2-211ENST00000554310 ROBO3Q96MS0 1386 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 USP17L12C9JPN9 530 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 USP17L21D6R901 530 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 IGHDP01880 384 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 EVX2Q03828 476 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 RAB3GAP1Q15042 981 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 CHD1LQ86WJ1 897 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 FEZ1Q99689 392 aa15.66■□□□□ 0.1
SHMT2-211ENST00000554310 GSG1L2A8MUP6 293 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 M0R2C6 588 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 OSBPP22059 807 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 GCLCP48506 637 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-211ENST00000554310 USP14P54578 494 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 PRMT2P55345 433 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 NUCB1Q02818 461 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 ZMYM1Q5SVZ6 1142 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 B4GALNT3Q6L9W6 998 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 USP17L2Q6R6M4 530 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 C16orf86Q6ZW13 317 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 TICAM2Q86XR7 235 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 SLC44A5Q8NCS7 719 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 C12orf42Q96LP6 360 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 ARHGAP39Q9C0H5 1083 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 KIAA1683Q9H0B3 1180 aa15.65■□□□□ 0.1
SHMT2-211ENST00000554310 RBBP6Q7Z6E9 1792 aaKnown RBP15.64■□□□□ 0.1
SHMT2-211ENST00000554310 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 MPHOSPH10O00566 681 aaKnown RBP15.64■□□□□ 0.09
SHMT2-211ENST00000554310 HOXA7P31268 230 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-211ENST00000554310 FCGRTP55899 365 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms