RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 LOC285556D6RIA3 1793 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 GDF11O95390 407 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 ATP5JP18859 108 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 OSBPP22059 807 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 SH3D19Q5HYK7 790 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 WDR18Q9BV38 432 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 PAG1Q9NWQ8 432 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 SRRDQ9UH36 339 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
DDX54-210ENST00000552375 MAGEB6P1A0A0J9YX57 407 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 TCRBV5S4A2TA0A5A2 114 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 ECM2O94769 699 aaPredicted RBP16.94■□□□□ 0.3
DDX54-210ENST00000552375 FMNL1O95466 1100 aaPredicted RBP16.94■□□□□ 0.3
DDX54-210ENST00000552375 HOXD10P28358 340 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 FCGRTP55899 365 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 JAG1P78504 1218 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 MTMR2Q13614 643 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 SHROOM1Q2M3G4 852 aaPredicted RBP16.94■□□□□ 0.3
DDX54-210ENST00000552375 SLFNL1Q499Z3 407 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 NBPF11Q86T75 865 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 HAUS7Q99871 368 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 CRNKL1Q9BZJ0 848 aaKnown RBP16.94■□□□□ 0.3
DDX54-210ENST00000552375 SERPINB13Q9UIV8 391 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 MYPNQ86TC9 1320 aa16.94■□□□□ 0.3
DDX54-210ENST00000552375 BACE1P56817 501 aa16.93■□□□□ 0.3
DDX54-210ENST00000552375 PABPC4Q13310 644 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDX54-210ENST00000552375 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
DDX54-210ENST00000552375 TTC6Q86TZ1 520 aa16.93■□□□□ 0.3
DDX54-210ENST00000552375 SH3TC2Q8TF17 1288 aa16.93■□□□□ 0.3
DDX54-210ENST00000552375 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
DDX54-210ENST00000552375 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
DDX54-210ENST00000552375 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
DDX54-210ENST00000552375 IGHDP01880 384 aa16.92■□□□□ 0.3
DDX54-210ENST00000552375 CHGBP05060 677 aa16.92■□□□□ 0.3
DDX54-210ENST00000552375 ADD2P35612 726 aa16.92■□□□□ 0.3
DDX54-210ENST00000552375 PRKCZQ05513 592 aa16.92■□□□□ 0.3
DDX54-210ENST00000552375 FAM110CQ1W6H9 321 aa16.92■□□□□ 0.3
DDX54-210ENST00000552375 TATDN1Q6P1N9 297 aa16.92■□□□□ 0.3
DDX54-210ENST00000552375 LCORLQ8N3X6 602 aa16.92■□□□□ 0.3
DDX54-210ENST00000552375 GH2P01242 217 aa16.91■□□□□ 0.3
DDX54-210ENST00000552375 RAET1EQ8TD07 263 aa16.91■□□□□ 0.3
DDX54-210ENST00000552375 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
DDX54-210ENST00000552375 TMEM106CQ9BVX2 250 aa16.91■□□□□ 0.3
DDX54-210ENST00000552375 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX54-210ENST00000552375 TMOD4Q9NZQ9 345 aa16.91■□□□□ 0.3
DDX54-210ENST00000552375 RBBP6Q7Z6E9 1792 aaKnown RBP16.91■□□□□ 0.3
DDX54-210ENST00000552375 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
DDX54-210ENST00000552375 AAMPQ13685 434 aa16.9■□□□□ 0.3
DDX54-210ENST00000552375 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
DDX54-210ENST00000552375 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
DDX54-210ENST00000552375 ASCC2Q9H1I8 757 aaPredicted RBP16.9■□□□□ 0.3
DDX54-210ENST00000552375 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
DDX54-210ENST00000552375 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 USP17L10C9JJH3 530 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 TNPO2O14787 897 aaKnown RBP16.89■□□□□ 0.29
DDX54-210ENST00000552375 MBD4O95243 580 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 POLR3DP05423 398 aaPredicted RBP16.89■□□□□ 0.29
DDX54-210ENST00000552375 MX1P20591 662 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 GRK4P32298 578 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 SHMT1P34896 483 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 PLCD1P51178 756 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 IRX3P78415 501 aaPredicted RBP16.89■□□□□ 0.29
DDX54-210ENST00000552375 GABPAQ06546 454 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 ARMT1Q9H993 441 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 DCP1AQ9NPI6 582 aaPredicted RBP16.89■□□□□ 0.29
DDX54-210ENST00000552375 MCM9Q9NXL9 1143 aa16.89■□□□□ 0.29
DDX54-210ENST00000552375 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
DDX54-210ENST00000552375 HOXA7P31268 230 aaPredicted RBP16.88■□□□□ 0.29
DDX54-210ENST00000552375 UBE3CQ15386 1083 aa16.88■□□□□ 0.29
DDX54-210ENST00000552375 CERKLQ49MI3 558 aaPredicted RBP16.88■□□□□ 0.29
DDX54-210ENST00000552375 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
DDX54-210ENST00000552375 MYCP01106 439 aaPredicted RBP16.87■□□□□ 0.29
DDX54-210ENST00000552375 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 PRPF38BQ5VTL8 546 aaKnown RBP16.87■□□□□ 0.29
DDX54-210ENST00000552375 PI4K2BQ8TCG2 481 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 FEZ1Q99689 392 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 MORF4L1Q9UBU8 362 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 GABRQQ9UN88 632 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
DDX54-210ENST00000552375 FLT3LGP49771 235 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 EVX2Q03828 476 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 IRF5Q13568 498 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 RAB3GAP1Q15042 981 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 USP17L2Q6R6M4 530 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 SMC5Q8IY18 1101 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 CABP5Q9NP86 173 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 EMILIN3Q9NT22 766 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 ATP8A2Q9NTI2 1148 aa16.86■□□□□ 0.29
DDX54-210ENST00000552375 ERC2O15083 957 aa16.85■□□□□ 0.29
DDX54-210ENST00000552375 PRKAB2O43741 272 aa16.85■□□□□ 0.29
DDX54-210ENST00000552375 CYP2D6P10635 497 aa16.85■□□□□ 0.29
DDX54-210ENST00000552375 USP14P54578 494 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms