RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 DOCK1Q14185 1865 aa11.82□□□□□ -0.52
GCN1-208ENST00000551549 CEP290O15078 2479 aa11.82□□□□□ -0.52
GCN1-208ENST00000551549 ZNF532Q9HCE3 1301 aa11.82□□□□□ -0.52
GCN1-208ENST00000551549 GH2P01242 217 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 ATP5JP18859 108 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 PLCD1P51178 756 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 BACE1P56817 501 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 EVX2Q03828 476 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 MTFR1Q15390 333 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 TATDN1Q6P1N9 297 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
GCN1-208ENST00000551549 ASCC2Q9H1I8 757 aaPredicted RBP11.81□□□□□ -0.52
GCN1-208ENST00000551549 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 SIPA1L1O43166 1804 aa11.81□□□□□ -0.52
GCN1-208ENST00000551549 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
GCN1-208ENST00000551549 CHGBP05060 677 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 GRK4P32298 578 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
GCN1-208ENST00000551549 PRPF38BQ5VTL8 546 aaKnown RBP11.8□□□□□ -0.52
GCN1-208ENST00000551549 LCORLQ8N3X6 602 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 HAUS7Q99871 368 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 LRRCC1Q9C099 1032 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 EHD4Q9H223 541 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 GINM1Q9NU53 330 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 PAG1Q9NWQ8 432 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 TMOD4Q9NZQ9 345 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
GCN1-208ENST00000551549 USP17L10C9JJH3 530 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 PEX10O60683 326 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 POLR3DP05423 398 aaPredicted RBP11.79□□□□□ -0.52
GCN1-208ENST00000551549 SHMT1P34896 483 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 GCLCP48506 637 aaPredicted RBP11.79□□□□□ -0.52
GCN1-208ENST00000551549 FLT3LGP49771 235 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 FAM110CQ1W6H9 321 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 CERKLQ49MI3 558 aaPredicted RBP11.79□□□□□ -0.52
GCN1-208ENST00000551549 TTC6Q86TZ1 520 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 SDR42E1Q8WUS8 393 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 P2RX7Q99572 595 aaKnown RBP11.79□□□□□ -0.52
GCN1-208ENST00000551549 CRNKL1Q9BZJ0 848 aaKnown RBP11.79□□□□□ -0.52
GCN1-208ENST00000551549 ARMT1Q9H993 441 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 BIN2Q9UBW5 565 aaPredicted RBP11.79□□□□□ -0.52
GCN1-208ENST00000551549 PTPRFP10586 1907 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 SZT2Q5T011 3432 aa11.79□□□□□ -0.52
GCN1-208ENST00000551549 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 PRKAB2O43741 272 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 ADCY3O60266 1144 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 CYP2D6P10635 497 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 CCL5P13501 91 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 ELNP15502 786 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
GCN1-208ENST00000551549 ADD2P35612 726 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 IRX3P78415 501 aaPredicted RBP11.78□□□□□ -0.52
GCN1-208ENST00000551549 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
GCN1-208ENST00000551549 CDK5RAP2Q96SN8 1893 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 MBD4O95243 580 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 GABPAQ06546 454 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
GCN1-208ENST00000551549 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 TSHZ3Q63HK5 1081 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 ACER1Q8TDN7 264 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 COA7Q96BR5 231 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 SHISA4Q96DD7 197 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 UNC93B1Q9H1C4 597 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 TXNRD2Q9NNW7 524 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.53
GCN1-208ENST00000551549 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
GCN1-208ENST00000551549 FOCADQ5VW36 1801 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 INHAP05111 366 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 HERVK_113P62684 666 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 UBXN2AP68543 259 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 IRF5Q13568 498 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 SLC44A5Q8NCS7 719 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.76□□□□□ -0.532e-7■■□□□ 14.1
GCN1-208ENST00000551549 RNF208Q9H0X6 261 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 ECHDC1Q9NTX5 307 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 RBPJLQ9UBG7 517 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 MORF4L1Q9UBU8 362 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 GJD2Q9UKL4 321 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
GCN1-208ENST00000551549 DNAH12Q6ZR08 3092 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 LOC285556D6RIA3 1793 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 ATAD5Q96QE3 1844 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 GJB1P08034 283 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 SEPT2Q15019 361 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 UBE3CQ15386 1083 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 Q3C1V9 767 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 GPRC5AQ8NFJ5 357 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 DYNLL2Q96FJ2 89 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 FEZ1Q99689 392 aa11.75□□□□□ -0.53
GCN1-208ENST00000551549 CABP5Q9NP86 173 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms