RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TRIB2Q92519 343 aa19.84■□□□□ 0.77
DDX55-212ENST00000544738 ZNF512BQ96KM6 892 aaPredicted RBP19.84■□□□□ 0.77
DDX55-212ENST00000544738 DBNDD2Q9BQY9 259 aa19.84■□□□□ 0.77
DDX55-212ENST00000544738 ATRNL1Q5VV63 1379 aa19.83■□□□□ 0.77
DDX55-212ENST00000544738 DDTLA6NHG4 134 aaPredicted RBP19.83■□□□□ 0.77
DDX55-212ENST00000544738 RHBDL3P58872 404 aa19.83■□□□□ 0.77
DDX55-212ENST00000544738 MAP3K10Q02779 954 aa19.83■□□□□ 0.77
DDX55-212ENST00000544738 SPP2Q13103 211 aa19.83■□□□□ 0.77
DDX55-212ENST00000544738 PICALMQ13492 652 aa19.83■□□□□ 0.77
DDX55-212ENST00000544738 PANK1Q8TE04 598 aa19.83■□□□□ 0.77
DDX55-212ENST00000544738 LBHD1Q9BQE6 289 aaPredicted RBP19.83■□□□□ 0.77
DDX55-212ENST00000544738 NOL10Q9BSC4 688 aaKnown RBP19.83■□□□□ 0.77
DDX55-212ENST00000544738 DDX4Q9NQI0 724 aaKnown RBP19.83■□□□□ 0.77
DDX55-212ENST00000544738 ZNF697Q5TEC3 545 aa19.82■□□□□ 0.76
DDX55-212ENST00000544738 CEP85Q6P2H3 762 aa19.82■□□□□ 0.76
DDX55-212ENST00000544738 TTC28Q96AY4 2481 aa19.81■□□□□ 0.76
DDX55-212ENST00000544738 PABPC4Q13310 644 aaKnown RBP eCLIP19.81■□□□□ 0.76
DDX55-212ENST00000544738 HSP90AB4PQ58FF6 505 aa19.81■□□□□ 0.76
DDX55-212ENST00000544738 ERC1Q8IUD2 1116 aa19.81■□□□□ 0.76
DDX55-212ENST00000544738 PROCA1Q8NCQ7 364 aaPredicted RBP19.81■□□□□ 0.76
DDX55-212ENST00000544738 CDX2Q99626 313 aaPredicted RBP19.81■□□□□ 0.76
DDX55-212ENST00000544738 ASCC2Q9H1I8 757 aaPredicted RBP19.81■□□□□ 0.76
DDX55-212ENST00000544738 SNRKQ9NRH2 765 aa19.81■□□□□ 0.76
DDX55-212ENST00000544738 DDX60LQ5H9U9 1706 aaKnown RBP19.81■□□□□ 0.76
DDX55-212ENST00000544738 TBC1D12O60347 775 aa19.8■□□□□ 0.76
DDX55-212ENST00000544738 BAG3O95817 575 aa19.8■□□□□ 0.76
DDX55-212ENST00000544738 COL6A1P12109 1028 aa19.8■□□□□ 0.76
DDX55-212ENST00000544738 HMGCS2P54868 508 aa19.8■□□□□ 0.76
DDX55-212ENST00000544738 MAP3K21Q5TCX8 1036 aa19.8■□□□□ 0.76
DDX55-212ENST00000544738 MAFAQ8NHW3 353 aaPredicted RBP19.8■□□□□ 0.76
DDX55-212ENST00000544738 CHMP4BQ9H444 224 aaKnown RBP19.8■□□□□ 0.76
DDX55-212ENST00000544738 DOCK2Q92608 1830 aa19.79■□□□□ 0.76
DDX55-212ENST00000544738 PLCG2P16885 1265 aa19.79■□□□□ 0.76
DDX55-212ENST00000544738 NAA16Q6N069 864 aaPredicted RBP19.79■□□□□ 0.76
DDX55-212ENST00000544738 ZNF280CQ8ND82 737 aa19.79■□□□□ 0.76
DDX55-212ENST00000544738 NUDT12Q9BQG2 462 aa19.79■□□□□ 0.76
DDX55-212ENST00000544738 DBNLQ9UJU6 430 aaKnown RBP19.79■□□□□ 0.76
DDX55-212ENST00000544738 DDX19BQ9UMR2 479 aa19.79■□□□□ 0.76
DDX55-212ENST00000544738 FAM196BA6NMK8 535 aa19.78■□□□□ 0.76
DDX55-212ENST00000544738 PEX10O60683 326 aa19.78■□□□□ 0.76
DDX55-212ENST00000544738 CYP2E1P05181 493 aaPredicted RBP19.78■□□□□ 0.76
DDX55-212ENST00000544738 CACNB2Q08289 660 aaPredicted RBP19.78■□□□□ 0.76
DDX55-212ENST00000544738 RPAP2Q8IXW5 612 aaPredicted RBP19.78■□□□□ 0.76
DDX55-212ENST00000544738 TEX11Q8IYF3 940 aa19.78■□□□□ 0.76
DDX55-212ENST00000544738 EAF2Q96CJ1 260 aaPredicted RBP19.78■□□□□ 0.76
DDX55-212ENST00000544738 CCDC8Q9H0W5 538 aaPredicted RBP19.78■□□□□ 0.76
DDX55-212ENST00000544738 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.78■□□□□ 0.76
DDX55-212ENST00000544738 COL2A1P02458 1487 aaPredicted RBP19.78■□□□□ 0.76
DDX55-212ENST00000544738 ZKSCAN1P17029 563 aaPredicted RBP19.77■□□□□ 0.76
DDX55-212ENST00000544738 CCND3P30281 292 aaPredicted RBP19.77■□□□□ 0.76
DDX55-212ENST00000544738 ZAP70P43403 619 aa19.77■□□□□ 0.76
DDX55-212ENST00000544738 LHX8Q68G74 356 aa19.77■□□□□ 0.76
DDX55-212ENST00000544738 SENP6Q9GZR1 1112 aaPredicted RBP19.77■□□□□ 0.76
DDX55-212ENST00000544738 OSBPL5Q9H0X9 879 aaPredicted RBP19.77■□□□□ 0.76
DDX55-212ENST00000544738 SEMA6BQ9H3T3 888 aa19.77■□□□□ 0.76
DDX55-212ENST00000544738 RCAN3Q9UKA8 241 aa19.77■□□□□ 0.76
DDX55-212ENST00000544738 EXOC6BQ9Y2D4 811 aa19.77■□□□□ 0.76
DDX55-212ENST00000544738 HMMRO75330 724 aa19.76■□□□□ 0.75
DDX55-212ENST00000544738 PPP4CP60510 307 aa19.76■□□□□ 0.75
DDX55-212ENST00000544738 DHX36Q9H2U1 1008 aaKnown RBP19.76■□□□□ 0.75
DDX55-212ENST00000544738 XRCC5P13010 732 aaKnown RBP19.75■□□□□ 0.75
DDX55-212ENST00000544738 IRX3P78415 501 aaPredicted RBP19.75■□□□□ 0.75
DDX55-212ENST00000544738 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
DDX55-212ENST00000544738 CCAR1Q8IX12 1150 aaKnown RBP19.75■□□□□ 0.75
DDX55-212ENST00000544738 GPRC5AQ8NFJ5 357 aa19.75■□□□□ 0.75
DDX55-212ENST00000544738 SH3RF3Q8TEJ3 882 aaPredicted RBP19.75■□□□□ 0.75
DDX55-212ENST00000544738 P2RX7Q99572 595 aaKnown RBP19.75■□□□□ 0.75
DDX55-212ENST00000544738 AATFQ9NY61 560 aaKnown RBP eCLIP19.75■□□□□ 0.75
DDX55-212ENST00000544738 TLR7Q9NYK1 1049 aaKnown RBP19.75■□□□□ 0.75
DDX55-212ENST00000544738 MORF4L1Q9UBU8 362 aa19.75■□□□□ 0.75
DDX55-212ENST00000544738 PRKAG2Q9UGJ0 569 aa19.75■□□□□ 0.75
DDX55-212ENST00000544738 HERC5Q9UII4 1024 aaKnown RBP19.75■□□□□ 0.75
DDX55-212ENST00000544738 COG6Q9Y2V7 657 aa19.75■□□□□ 0.75
DDX55-212ENST00000544738 PTPRFP10586 1907 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 COL9A1P20849 921 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 ATN1P54259 1190 aaPredicted RBP19.74■□□□□ 0.75
DDX55-212ENST00000544738 CCL14Q16627 93 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 TMED8Q6PL24 325 aaPredicted RBP19.74■□□□□ 0.75
DDX55-212ENST00000544738 AACSQ86V21 672 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 TRMT44Q8IYL2 757 aaKnown RBP19.74■□□□□ 0.75
DDX55-212ENST00000544738 SOCS4Q8WXH5 440 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 MYLIPQ8WY64 445 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 SYMPKQ92797 1274 aaKnown RBP19.74■□□□□ 0.75
DDX55-212ENST00000544738 ZBTB40Q9NUA8 1239 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 PI4KBQ9UBF8 816 aa19.74■□□□□ 0.75
DDX55-212ENST00000544738 USP17L5A8MUK1 530 aa19.73■□□□□ 0.75
DDX55-212ENST00000544738 CERS3Q8IU89 383 aa19.73■□□□□ 0.75
DDX55-212ENST00000544738 RHPN1Q8TCX5 695 aa19.73■□□□□ 0.75
DDX55-212ENST00000544738 PIH1D3Q9NQM4 214 aaKnown RBP19.73■□□□□ 0.75
DDX55-212ENST00000544738 IDH1O75874 414 aaKnown RBP19.72■□□□□ 0.75
DDX55-212ENST00000544738 SHHQ15465 462 aa19.72■□□□□ 0.75
DDX55-212ENST00000544738 CLASRPQ8N2M8 674 aaKnown RBP19.72■□□□□ 0.75
DDX55-212ENST00000544738 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
DDX55-212ENST00000544738 TXNRD2Q9NNW7 524 aa19.72■□□□□ 0.75
DDX55-212ENST00000544738 MAST2Q6P0Q8 1798 aa19.72■□□□□ 0.75
DDX55-212ENST00000544738 PHIPQ8WWQ0 1821 aa19.72■□□□□ 0.75
DDX55-212ENST00000544738 MAPK4P31152 587 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 CAP2P40123 477 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 RGS2P41220 211 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 RRP1BQ14684 758 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms