RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 NFIXQ14938 502 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 CCDC85BQ15834 202 aaPredicted RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 MAP7D1Q3KQU3 841 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZNF468Q5VIY5 522 aaPredicted RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 EPS8L1Q8TE68 723 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 C7orf43Q8WVR3 580 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 MASTLQ96GX5 879 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 PAWRQ96IZ0 340 aaKnown RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 LBHD1Q9BQE6 289 aaPredicted RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 BCL2L13Q9BXK5 485 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 RAB6BQ9NRW1 208 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 BIN2Q9UBW5 565 aaPredicted RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 CHMP3Q9Y3E7 222 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 COL2A1P02458 1487 aaPredicted RBP3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZFYVE26Q68DK2 2539 aa3.26□□□□□ -1.89
TRAV1-1-201ENST00000542354 ATRNL1Q5VV63 1379 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 DLEC1Q9Y238 1755 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 BPTFQ12830 3046 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 CGNL1Q0VF96 1302 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 CDHR2Q9BYE9 1310 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 REV3LO60673 3130 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 DOPEY1Q5JWR5 2465 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 MRC1P22897 1456 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 MANSC4A6NHS7 340 aaPredicted RBP3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 BTBD11A6QL63 1104 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 C9orf172C9J069 976 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 BACH1O14867 736 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 KHNYNO15037 678 aaKnown RBP3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 BNIP3LO60238 219 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 EGFRP00533 1210 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 IL2RAP01589 272 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 FAM157BP0CG42 384 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 SCTRP47872 440 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 KCNQ1P51787 676 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 KIF22Q14807 665 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 SAMD5Q5TGI4 173 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 LARGE2Q8N3Y3 721 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 TRIM34Q9BYJ4 488 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 FAM117AQ9C073 453 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 C14orf93Q9H972 538 aaKnown RBP3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 NDFIP2Q9NV92 336 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 MARK1Q9P0L2 795 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 ASAP1Q9ULH1 1129 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 ANKRD17O75179 2603 aaKnown RBP3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 KIF1BO60333 1816 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 ABCA12Q86UK0 2595 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 MYO18BQ8IUG5 2567 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 CACNA1HO95180 2353 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 DAPK1P53355 1430 aa3.25□□□□□ -1.89
TRAV1-1-201ENST00000542354 MAP3K19Q56UN5 1328 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 ELOA3CA0A087WX78 387 aaPredicted RBP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 ELOA3DA6NLF2 546 aaPredicted RBP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 CYSRT1A8MQ03 144 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 ADM5C9JUS6 153 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 UBE2Q2LH0YL09 131 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 SRGNP10124 158 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 SOX11P35716 441 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 CHRNA4P43681 627 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 GMPSP49915 693 aaPredicted RBP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 RAC1P63000 192 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 TFF2Q03403 129 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 CRHR2Q13324 411 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 DOC2BQ14184 412 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 PUM1Q14671 1186 aaKnown RBP eCLIP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 HIF1AQ16665 826 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 ELOA3BQ3SY89 546 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 ARTNQ5T4W7 220 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 USPL1Q5W0Q7 1092 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 WWC1Q8IX03 1113 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 NIM1KQ8IY84 436 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 TMEFF1Q8IYR6 380 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 ELOA3Q8NG57 546 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 DCAF11Q8TEB1 546 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 CDCA5Q96FF9 252 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 PSMD1Q99460 953 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 HNRNPABQ99729 332 aaKnown RBP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 PLVAPQ9BX97 442 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 KRTAP4-8Q9BYQ9 185 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 ZCCHC2Q9C0B9 1178 aaKnown RBP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 CEP126Q9P2H0 1117 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 CNOT7Q9UIV1 285 aaKnown RBP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 HELZ2Q9BYK8 2649 aaKnown RBP3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 LAMB2P55268 1798 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 GVINP1Q7Z2Y8 2422 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 RAB3GAP2Q9H2M9 1393 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 MYO9BQ13459 2157 aa3.24□□□□□ -1.89
TRAV1-1-201ENST00000542354 DNAH12Q6ZR08 3092 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 PROB1E7EW31 1015 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 ERC2O15083 957 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 LZTS3O60299 673 aaPredicted RBP3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 SIN3BO75182 1162 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 INHAP05111 366 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 MAPTP10636 758 aaKnown RBP3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 IGFBP4P22692 258 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 HOXD10P28358 340 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 GRK4P32298 578 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 SMTNP53814 917 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 CTBSQ01459 385 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 CAP1Q01518 475 aa3.23□□□□□ -1.89
TRAV1-1-201ENST00000542354 TNIP1Q15025 636 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms