RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 EFCC1Q9HA90 598 aa23.33■■□□□ 1.33
SAMD1-203ENST00000541938 ATP8A2Q9NTI2 1148 aa23.33■■□□□ 1.33
SAMD1-203ENST00000541938 HPS5Q9UPZ3 1129 aa23.33■■□□□ 1.33
SAMD1-203ENST00000541938 PHIPQ8WWQ0 1821 aa23.33■■□□□ 1.32
SAMD1-203ENST00000541938 SALL3Q9BXA9 1300 aa23.33■■□□□ 1.32
SAMD1-203ENST00000541938 RNF113AO15541 343 aaKnown RBP23.32■■□□□ 1.32
SAMD1-203ENST00000541938 IGHDP01880 384 aa23.32■■□□□ 1.32
SAMD1-203ENST00000541938 CYP2D6P10635 497 aa23.32■■□□□ 1.32
SAMD1-203ENST00000541938 SLC4A4Q9Y6R1 1079 aa23.32■■□□□ 1.32
SAMD1-203ENST00000541938 GH2P01242 217 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 SHMT1P34896 483 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 HMGCS2P54868 508 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 GABPAQ06546 454 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 CERKLQ49MI3 558 aaPredicted RBP23.31■■□□□ 1.32
SAMD1-203ENST00000541938 SMC5Q8IY18 1101 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 AGTPBP1Q9UPW5 1226 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 SLC45A1Q9Y2W3 748 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 ADGRA2Q96PE1 1338 aa23.31■■□□□ 1.32
SAMD1-203ENST00000541938 ZFYP08048 801 aaPredicted RBP23.3■■□□□ 1.32
SAMD1-203ENST00000541938 ARHGEF6Q15052 776 aa23.3■■□□□ 1.32
SAMD1-203ENST00000541938 SH3D19Q5HYK7 790 aa23.3■■□□□ 1.32
SAMD1-203ENST00000541938 TREML2Q5T2D2 321 aa23.3■■□□□ 1.32
SAMD1-203ENST00000541938 B4GALNT3Q6L9W6 998 aa23.3■■□□□ 1.32
SAMD1-203ENST00000541938 PROCA1Q8NCQ7 364 aaPredicted RBP23.3■■□□□ 1.32
SAMD1-203ENST00000541938 APPBP2Q92624 585 aa23.3■■□□□ 1.32
SAMD1-203ENST00000541938 OSBP2Q969R2 916 aa23.3■■□□□ 1.32
SAMD1-203ENST00000541938 ATAD5Q96QE3 1844 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 BACE1P56817 501 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 LACTBP83111 547 aaPredicted RBP23.29■■□□□ 1.32
SAMD1-203ENST00000541938 KIF22Q14807 665 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 ABCB5Q2M3G0 1257 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 STRBPQ96SI9 672 aaKnown RBP23.29■■□□□ 1.32
SAMD1-203ENST00000541938 LNPKQ9C0E8 428 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 STAP2Q9UGK3 403 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 PTPN22Q9Y2R2 807 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 MYH7P12883 1935 aa23.29■■□□□ 1.32
SAMD1-203ENST00000541938 ECM2O94769 699 aaPredicted RBP23.28■■□□□ 1.32
SAMD1-203ENST00000541938 PDE1AP54750 535 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 IRX6P78412 446 aaPredicted RBP23.28■■□□□ 1.32
SAMD1-203ENST00000541938 MTMR2Q13614 643 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 LRRFIP1Q32MZ4 808 aaKnown RBP23.28■■□□□ 1.32
SAMD1-203ENST00000541938 DYNLL2Q96FJ2 89 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 FSD1Q9BTV5 496 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 ARHGAP39Q9C0H5 1083 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 CABP5Q9NP86 173 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 NAV1Q8NEY1 1877 aa23.28■■□□□ 1.32
SAMD1-203ENST00000541938 PTPRFP10586 1907 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 CYP2D7A0A087X1C5 515 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 C19orf81C9J6K1 198 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 USP17L10C9JJH3 530 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 USP17L12C9JPN9 530 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 USP17L21D6R901 530 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 BCRP11274 1271 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 C12orf60Q5U649 245 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 TMOD4Q9NZQ9 345 aa23.27■■□□□ 1.32
SAMD1-203ENST00000541938 DDX60LQ5H9U9 1706 aaKnown RBP23.26■■□□□ 1.31
SAMD1-203ENST00000541938 SMIM22K7EJ46 135 aa23.26■■□□□ 1.31
SAMD1-203ENST00000541938 RAB3GAP1Q15042 981 aa23.26■■□□□ 1.31
SAMD1-203ENST00000541938 AMOTL1Q8IY63 956 aa23.26■■□□□ 1.31
SAMD1-203ENST00000541938 SLC44A5Q8NCS7 719 aa23.26■■□□□ 1.31
SAMD1-203ENST00000541938 M0R2C6 588 aa23.25■■□□□ 1.31
SAMD1-203ENST00000541938 GPAA1O43292 621 aa23.25■■□□□ 1.31
SAMD1-203ENST00000541938 PABPC4Q13310 644 aaKnown RBP eCLIP23.25■■□□□ 1.31
SAMD1-203ENST00000541938 CTR9Q6PD62 1173 aa23.25■■□□□ 1.31
SAMD1-203ENST00000541938 SMCR8Q8TEV9 937 aaPredicted RBP23.25■■□□□ 1.31
SAMD1-203ENST00000541938 SWAP70Q9UH65 585 aa23.25■■□□□ 1.31
SAMD1-203ENST00000541938 PNMA3Q9UL41 463 aa23.25■■□□□ 1.31
SAMD1-203ENST00000541938 GSG1L2A8MUP6 293 aa23.24■■□□□ 1.31
SAMD1-203ENST00000541938 OSBPP22059 807 aa23.24■■□□□ 1.31
SAMD1-203ENST00000541938 CTGFP29279 349 aa23.24■■□□□ 1.31
SAMD1-203ENST00000541938 GUCY1A2P33402 732 aa23.24■■□□□ 1.31
SAMD1-203ENST00000541938 PSMC4P43686 418 aa23.24■■□□□ 1.31
SAMD1-203ENST00000541938 CHD1LQ86WJ1 897 aa23.24■■□□□ 1.31
SAMD1-203ENST00000541938 SEC62Q99442 399 aaKnown RBP23.24■■□□□ 1.31
SAMD1-203ENST00000541938 MPHOSPH10O00566 681 aaKnown RBP23.23■■□□□ 1.31
SAMD1-203ENST00000541938 NUCB1Q02818 461 aa23.23■■□□□ 1.31
SAMD1-203ENST00000541938 USP17L2Q6R6M4 530 aa23.23■■□□□ 1.31
SAMD1-203ENST00000541938 EVI5LQ96CN4 794 aa23.23■■□□□ 1.31
SAMD1-203ENST00000541938 EMILIN3Q9NT22 766 aa23.23■■□□□ 1.31
SAMD1-203ENST00000541938 TAOK2Q9UL54 1235 aa23.23■■□□□ 1.31
SAMD1-203ENST00000541938 CDK8P49336 464 aa23.22■■□□□ 1.31
SAMD1-203ENST00000541938 SEPT2Q15019 361 aa23.22■■□□□ 1.31
SAMD1-203ENST00000541938 ZMYM1Q5SVZ6 1142 aa23.22■■□□□ 1.31
SAMD1-203ENST00000541938 ACER1Q8TDN7 264 aa23.22■■□□□ 1.31
SAMD1-203ENST00000541938 TRIM47Q96LD4 638 aa23.22■■□□□ 1.31
SAMD1-203ENST00000541938 ASCC2Q9H1I8 757 aaPredicted RBP23.22■■□□□ 1.31
SAMD1-203ENST00000541938 BAZ2AQ9UIF9 1905 aaKnown RBP23.21■■□□□ 1.31
SAMD1-203ENST00000541938 FMNL1O95466 1100 aaPredicted RBP23.21■■□□□ 1.31
SAMD1-203ENST00000541938 GNRH1P01148 92 aa23.21■■□□□ 1.31
SAMD1-203ENST00000541938 GNAT2P19087 354 aa23.21■■□□□ 1.31
SAMD1-203ENST00000541938 HOXA7P31268 230 aaPredicted RBP23.21■■□□□ 1.31
SAMD1-203ENST00000541938 ZYXQ15942 572 aaKnown RBP23.21■■□□□ 1.31
SAMD1-203ENST00000541938 GIMAP6Q6P9H5 292 aa23.21■■□□□ 1.31
SAMD1-203ENST00000541938 C16orf86Q6ZW13 317 aa23.21■■□□□ 1.31
SAMD1-203ENST00000541938 FEZ1Q99689 392 aa23.21■■□□□ 1.31
SAMD1-203ENST00000541938 ARPP21Q9UBL0 812 aaPredicted RBP23.21■■□□□ 1.31
SAMD1-203ENST00000541938 PTCH2Q9Y6C5 1203 aa23.21■■□□□ 1.31
SAMD1-203ENST00000541938 PATL2C9JE40 543 aaKnown RBP23.2■■□□□ 1.3
SAMD1-203ENST00000541938 APPP05067 770 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms