RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 GTF2IP78347 998 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 TRIM32Q13049 653 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 TTF1Q15361 905 aaPredicted RBP9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 STOX1Q6ZVD7 989 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 CHST3Q7LGC8 479 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 ZNF804AQ7Z570 1209 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 FAM43AQ8N2R8 423 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 LRRC2Q9BYS8 371 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 MTFR1LQ9H019 292 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 CDK5RAP2Q96SN8 1893 aa9.22□□□□□ -0.93
AC005840.3-201ENST00000541888 SPDYE5A6NIY4 337 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 MAP3K12Q12852 859 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 MYSM1Q5VVJ2 828 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 STYK1Q6J9G0 422 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 TDRD7Q8NHU6 1098 aaKnown RBP9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 AIDAQ96BJ3 306 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 AATFQ9NY61 560 aaKnown RBP eCLIP9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 PCDHAC2Q9Y5I4 1007 aa9.21□□□□□ -0.93
AC005840.3-201ENST00000541888 CYP2D7A0A087X1C5 515 aa9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 MCCP23508 829 aa9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 CERS5Q8N5B7 392 aa9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 SLC16A10Q8TF71 515 aa9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 C7orf43Q8WVR3 580 aa9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 NUDT12Q9BQG2 462 aa9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 ZC3H12CQ9C0D7 883 aaKnown RBP9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 EPB41L4AQ9HCS5 686 aaPredicted RBP9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 ZNF277Q9NRM2 450 aaPredicted RBP9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 RFX7Q2KHR2 1363 aa9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 ZNF646O15015 1829 aaPredicted RBP9.21□□□□□ -0.94
AC005840.3-201ENST00000541888 MAST2Q6P0Q8 1798 aa9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 FGAP02671 866 aa9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 POLD1P28340 1107 aa9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 SCNN1DP51172 638 aa9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 MFSD14BQ5SR56 506 aa9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 NAA16Q6N069 864 aaPredicted RBP9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 DZIP1Q86YF9 867 aaKnown RBP9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 HSCBQ8IWL3 235 aa9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 TTLL6Q8N841 843 aa9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
AC005840.3-201ENST00000541888 LARGE1O95461 756 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 ZFYP08048 801 aaPredicted RBP9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 CTDSPL2Q05D32 466 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 RABEP1Q15276 862 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 UBE3CQ15386 1083 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 CNKSR1Q969H4 720 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 GPBP1L1Q9HC44 474 aaPredicted RBP9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 LIMD1Q9UGP4 676 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 BCS1LQ9Y276 419 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 TACC3Q9Y6A5 838 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 SLC4A4Q9Y6R1 1079 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 SNED1Q8TER0 1413 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 LDHBP07195 334 aaKnown RBP9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 AK2P54819 239 aa9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 TMX4Q9H1E5 349 aaPredicted RBP9.19□□□□□ -0.94
AC005840.3-201ENST00000541888 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 YDJCA8MPS7 323 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 GSG1L2A8MUP6 293 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 PPIP5K2O43314 1243 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 ECE2O60344 883 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 DGAT1O75907 488 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 IL1R1P14778 569 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 RASSF7Q02833 373 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 PKDCCQ504Y2 493 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 DESI1Q6ICB0 168 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 ZSCAN25Q6NSZ9 544 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 RAB11FIP4Q86YS3 637 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 TBC1D10CQ8IV04 446 aa9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 ZGPATQ8N5A5 531 aaKnown RBP9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 RIOK1Q9BRS2 568 aaKnown RBP9.18□□□□□ -0.94
AC005840.3-201ENST00000541888 RPAP1Q9BWH6 1393 aaPredicted RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 E7EWF7 191 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 K7ELQ4 463 aaPredicted RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 RAD17O75943 681 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 SLURP2P0DP57 97 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 CYP2D6P10635 497 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 ZKSCAN1P17029 563 aaPredicted RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 STK3Q13188 491 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 BECN1Q14457 450 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 PTPRNQ16849 979 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 PRPF38BQ5VTL8 546 aaKnown RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 RUFY3Q7L099 469 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 KIAA0825Q8IV33 1275 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 DSCC1Q9BVC3 393 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 TOR4AQ9NXH8 423 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 FER1L6Q2WGJ9 1857 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 FAM187AA6NFU0 413 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 MINDY4BA8MYZ0 360 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 CFAP99D6REC4 459 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 HSP90AA1P07900 732 aaKnown RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 CCNYL3P0C7X3 344 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms