RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 SOCS4Q8WXH5 440 aa9□□□□□ -0.97
LRTOMT-217ENST00000539587 NSUN4Q96CB9 384 aaKnown RBP9□□□□□ -0.97
LRTOMT-217ENST00000539587 FAM161BQ96MY7 647 aa9□□□□□ -0.97
LRTOMT-217ENST00000539587 DNAJC18Q9H819 358 aa9□□□□□ -0.97
LRTOMT-217ENST00000539587 COPRSQ9NQ92 184 aa9□□□□□ -0.97
LRTOMT-217ENST00000539587 EMILIN3Q9NT22 766 aa9□□□□□ -0.97
LRTOMT-217ENST00000539587 SALL2Q9Y467 1007 aaPredicted RBP9□□□□□ -0.97
LRTOMT-217ENST00000539587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9□□□□□ -0.97
LRTOMT-217ENST00000539587 PTPRCP08575 1304 aa9□□□□□ -0.97
LRTOMT-217ENST00000539587 PIEZO1Q92508 2521 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 C19orf81C9J6K1 198 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 HOXC6P09630 235 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 ZKSCAN1P17029 563 aaPredicted RBP8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 ERVK-9P63128 1117 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 ERVK-24P63145 666 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 SHROOM1Q2M3G4 852 aaPredicted RBP8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 SPTY2D1Q68D10 685 aaPredicted RBP8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 GPR142Q7Z601 462 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 SLF2Q8IX21 1173 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 MAFAQ8NHW3 353 aaPredicted RBP8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 SSH1Q8WYL5 1049 aa8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 HERC5Q9UII4 1024 aaKnown RBP8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 MYO5AQ9Y4I1 1855 aaKnown RBP8.99□□□□□ -0.97
LRTOMT-217ENST00000539587 RGS2P41220 211 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 SMAD3P84022 425 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 MTMR2Q13614 643 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 SNX17Q15036 470 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 PLEKHH3Q7Z736 793 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 DZIP1Q86YF9 867 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 LPAR1Q92633 364 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 EDC3Q96F86 508 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 SENP6Q9GZR1 1112 aaPredicted RBP8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 SIL1Q9H173 461 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 AS3MTQ9HBK9 375 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 GINM1Q9NU53 330 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 HMG20BQ9P0W2 317 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 ABCF2Q9UG63 623 aa8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 PA2G4Q9UQ80 394 aaKnown RBP8.98□□□□□ -0.97
LRTOMT-217ENST00000539587 RTP1P59025 263 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 PPP4CP60510 307 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 C1orf53Q5VUE5 145 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 SLC39A5Q6ZMH5 540 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 TBC1D9Q6ZT07 1266 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 ERICH6Q7L0X2 663 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 FOXP4Q8IVH2 680 aaPredicted RBP8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 MYLIPQ8WY64 445 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 XAGE2Q96GT9 111 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 APBA2Q99767 749 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 PI4KBQ9UBF8 816 aa8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 DDX20Q9UHI6 824 aaKnown RBP8.97□□□□□ -0.97
LRTOMT-217ENST00000539587 TRIM43BA6NCK2 446 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 SLC15A5A6NIM6 579 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 USP17L10C9JJH3 530 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 DNM1LO00429 736 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 LDHCP07864 332 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 ASNSP08243 561 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 PTPREP23469 700 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 IRX3P78415 501 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 GRB14Q14449 540 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 PI16Q6UXB8 463 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 LBX2Q6XYB7 198 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 SH3RF1Q7Z6J0 888 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 NPLOC4Q8TAT6 608 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 SH3RF3Q8TEJ3 882 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 GTF3C2Q8WUA4 911 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 SYMPKQ92797 1274 aaKnown RBP8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 TRIM43Q96BQ3 446 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 C12orf42Q96LP6 360 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 LBHD1Q9BQE6 289 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 DHX36Q9H2U1 1008 aaKnown RBP8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 RABGAP1Q9Y3P9 1069 aa8.96□□□□□ -0.98
LRTOMT-217ENST00000539587 MYH1P12882 1939 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 TMEM265A0A087WTH1 108 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 A0A1B0GUL7 405 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 MSCO60682 206 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 CYBAP13498 195 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 COL9A1P20849 921 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 ITGB8P26012 769 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 ATN1P54259 1190 aaPredicted RBP8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 EPHB4P54760 987 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 TFCP2Q12800 502 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 PDE3AQ14432 1141 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 TEX11Q8IYF3 940 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 USP38Q8NB14 1042 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 SPATA5Q8NB90 893 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 BADQ92934 168 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 PDLIM7Q9NR12 457 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 TMOD4Q9NZQ9 345 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 BTBD7Q9P203 1132 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 ZBTB21Q9ULJ3 1066 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 ZNF236Q9UL36 1845 aa8.95□□□□□ -0.98
LRTOMT-217ENST00000539587 GSTO1P78417 241 aa8.94□□□□□ -0.98
LRTOMT-217ENST00000539587 MTX1Q13505 466 aa8.94□□□□□ -0.98
LRTOMT-217ENST00000539587 GJC2Q5T442 439 aaPredicted RBP8.94□□□□□ -0.98
LRTOMT-217ENST00000539587 MFSD14CQ5VZR4 134 aa8.94□□□□□ -0.98
LRTOMT-217ENST00000539587 TATDN1Q6P1N9 297 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms