RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 IFNAR1P17181 557 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 TDO2P48775 406 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 ETF1P62495 437 aaKnown RBP14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 SSRP1Q08945 709 aaKnown RBP14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 SMARCE1Q969G3 411 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 TOMM22Q9NS69 142 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 BCORQ6W2J9 1755 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 PNPLA7Q6ZV29 1317 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 COL1A1P02452 1464 aaPredicted RBP14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 GYG1P46976 350 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 NR5A1Q13285 461 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 CREBRFQ8IUR6 639 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 GRAMD1CQ8IYS0 662 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 PHLPP1O60346 1717 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 CHD4Q14839 1912 aa14.4□□□□□ -0.1
SFSWAP-208ENST00000539506 KCNQ2O43526 872 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 MMP1P03956 469 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 EVX2Q03828 476 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 WWC2Q6AWC2 1192 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 CPLX2Q6PUV4 134 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 NOSTRINQ8IVI9 506 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 DHX37Q8IY37 1157 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 OXER1Q8TDS5 423 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 ZNF384Q8TF68 577 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 LRP2BPQ9P2M1 347 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 KCNQ4P56696 695 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 MTF1Q14872 753 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 KRT23Q9C075 422 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 STK36Q9NRP7 1315 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 TAF1P21675 1872 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 NID2Q14112 1375 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 CYP2D7A0A087X1C5 515 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 MDM2Q00987 491 aaPredicted RBP14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 PDE4BQ07343 736 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 DDB1Q16531 1140 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 CCDC93Q567U6 631 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 DIS3L2Q8IYB7 885 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 CNNM2Q9H8M5 875 aa14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 PUF60Q9UHX1 559 aaKnown RBP14.39□□□□□ -0.11
SFSWAP-208ENST00000539506 WNK3Q9BYP7 1800 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 ANKRD65E5RJM6 399 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 OAS2P29728 719 aaKnown RBP14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 IGHMBP2P38935 993 aaKnown RBP14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 TRIM65Q6PJ69 517 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 KRBA2Q6ZNG9 492 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 TOGARAM2Q6ZUX3 1019 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 CRACR2BQ8N4Y2 399 aaPredicted RBP14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 L2HGDHQ9H9P8 463 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 KCNH3Q9ULD8 1083 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 TOP1P11387 765 aaKnown RBP14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 CYP7A1P22680 504 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 PPARAQ07869 468 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 WTAPQ15007 396 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 RTN1Q16799 776 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 LZTFL1Q9NQ48 299 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 ABCF2Q9UG63 623 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 PCDHA5Q9Y5H7 936 aa14.38□□□□□ -0.11
SFSWAP-208ENST00000539506 TRIM29Q14134 588 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 PARP10Q53GL7 1025 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 FAM205CA6NFA0 338 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 MINDY4BA8MYZ0 360 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 CUTAO60888 179 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 CYP2C19P33261 490 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 DYNLL1P63167 89 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 TPM4P67936 248 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 SEC23AQ15436 765 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 ERFEQ4G0M1 354 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 USP49Q70CQ1 688 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 CCDC150Q8NCX0 1101 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 FAM53CQ9NYF3 392 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 FBXO2Q9UK22 296 aaPredicted RBP14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 RTL9Q8NET4 1388 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 CICQ96RK0 1608 aaPredicted RBP14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 TRIM66O15016 1216 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 MCM6Q14566 821 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 EARS2Q5JPH6 523 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 FANCBQ8NB91 859 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 NUP133Q8WUM0 1156 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 RIOK1Q9BRS2 568 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 ZNF804BA4D1E1 1349 aa14.37□□□□□ -0.11
SFSWAP-208ENST00000539506 ROBO1Q9Y6N7 1651 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 IKBKBO14920 756 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 NRDCO43847 1150 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 PHACTR2O75167 634 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 GNAT2P19087 354 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 REXO1L1PQ8IX06 675 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 NACAP1Q9BZK3 213 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 IMPACTQ9P2X3 320 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 LCMT1Q9UIC8 334 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 KLRK1P26718 216 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms