RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 NSUN4Q96CB9 384 aaKnown RBP15.36■□□□□ 0.05
CAPN1-223ENST00000533079 LBHD1Q9BQE6 289 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-223ENST00000533079 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 DNAH12Q6ZR08 3092 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
CAPN1-223ENST00000533079 MORN1Q5T089 497 aa15.35■□□□□ 0.05
CAPN1-223ENST00000533079 GPR142Q7Z601 462 aa15.35■□□□□ 0.05
CAPN1-223ENST00000533079 ZNF384Q8TF68 577 aa15.35■□□□□ 0.05
CAPN1-223ENST00000533079 FOCADQ5VW36 1801 aa15.35■□□□□ 0.05
CAPN1-223ENST00000533079 USP17L10C9JJH3 530 aa15.34■□□□□ 0.05
CAPN1-223ENST00000533079 E9PSI1 815 aa15.34■□□□□ 0.05
CAPN1-223ENST00000533079 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-223ENST00000533079 PLEKHH3Q7Z736 793 aa15.34■□□□□ 0.05
CAPN1-223ENST00000533079 TEX11Q8IYF3 940 aa15.34■□□□□ 0.05
CAPN1-223ENST00000533079 XAGE2Q96GT9 111 aa15.34■□□□□ 0.05
CAPN1-223ENST00000533079 P2RX7Q99572 595 aaKnown RBP15.34■□□□□ 0.05
CAPN1-223ENST00000533079 NOL10Q9BSC4 688 aaKnown RBP15.34■□□□□ 0.05
CAPN1-223ENST00000533079 TXNRD2Q9NNW7 524 aa15.34■□□□□ 0.05
CAPN1-223ENST00000533079 PRKAG2Q9UGJ0 569 aa15.34■□□□□ 0.05
CAPN1-223ENST00000533079 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
CAPN1-223ENST00000533079 CDH23Q9H251 3354 aa15.33■□□□□ 0.05
CAPN1-223ENST00000533079 PRUNE2Q8WUY3 3088 aa15.33■□□□□ 0.05
CAPN1-223ENST00000533079 GLRX3O76003 335 aaKnown RBP15.33■□□□□ 0.04
CAPN1-223ENST00000533079 PLCG2P16885 1265 aa15.33■□□□□ 0.04
CAPN1-223ENST00000533079 RRP1BQ14684 758 aaKnown RBP15.33■□□□□ 0.04
CAPN1-223ENST00000533079 METTL16Q86W50 562 aaKnown RBP15.33■□□□□ 0.04
CAPN1-223ENST00000533079 SPATA5Q8NB90 893 aa15.33■□□□□ 0.04
CAPN1-223ENST00000533079 HMG20BQ9P0W2 317 aa15.33■□□□□ 0.04
CAPN1-223ENST00000533079 RBPJLQ9UBG7 517 aa15.33■□□□□ 0.04
CAPN1-223ENST00000533079 ZNF236Q9UL36 1845 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 DNM1LO00429 736 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 IGSF3O75054 1194 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 ARID4AP29374 1257 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-223ENST00000533079 TIMM10P62072 90 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 CCNA1P78396 465 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 MAP2K5Q13163 448 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 MFSD14CQ5VZR4 134 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 TRIM34Q9BYJ4 488 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 PORCNQ9H237 461 aa15.32■□□□□ 0.04
CAPN1-223ENST00000533079 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
CAPN1-223ENST00000533079 BAG3O95817 575 aa15.31■□□□□ 0.04
CAPN1-223ENST00000533079 CCL14Q16627 93 aa15.31■□□□□ 0.04
CAPN1-223ENST00000533079 LPAR1Q92633 364 aa15.31■□□□□ 0.04
CAPN1-223ENST00000533079 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
CAPN1-223ENST00000533079 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
CAPN1-223ENST00000533079 DDX20Q9UHI6 824 aaKnown RBP15.31■□□□□ 0.04
CAPN1-223ENST00000533079 ZBTB21Q9ULJ3 1066 aa15.31■□□□□ 0.04
CAPN1-223ENST00000533079 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
CAPN1-223ENST00000533079 FLT1P17948 1338 aa15.3■□□□□ 0.04
CAPN1-223ENST00000533079 MTX1Q13505 466 aa15.3■□□□□ 0.04
CAPN1-223ENST00000533079 ATF7IPQ6VMQ6 1270 aa15.3■□□□□ 0.04
CAPN1-223ENST00000533079 FOXP4Q8IVH2 680 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-223ENST00000533079 CRACR2BQ8N4Y2 399 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-223ENST00000533079 SH3RF3Q8TEJ3 882 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-223ENST00000533079 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
CAPN1-223ENST00000533079 PAGR1Q9BTK6 254 aa15.3■□□□□ 0.04
CAPN1-223ENST00000533079 SENP6Q9GZR1 1112 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-223ENST00000533079 DNAJC18Q9H819 358 aa15.3■□□□□ 0.04
CAPN1-223ENST00000533079 CDK5RAP2Q96SN8 1893 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 SLC15A5A6NIM6 579 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 HOXC6P09630 235 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 UQCRFS1P1P0C7P4 283 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 TFCP2Q12800 502 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 GORABQ5T7V8 394 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L2Q6R6M4 530 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 MAFAQ8NHW3 353 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-223ENST00000533079 EDC3Q96F86 508 aaKnown RBP15.29■□□□□ 0.04
CAPN1-223ENST00000533079 FAM161BQ96MY7 647 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 API5Q9BZZ5 524 aaKnown RBP15.29■□□□□ 0.04
CAPN1-223ENST00000533079 LRP2BPQ9P2M1 347 aa15.29■□□□□ 0.04
CAPN1-223ENST00000533079 MUC3AQ02505 3323 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 TMEM265A0A087WTH1 108 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 HLA-DOAP06340 250 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 CT47B1P0C2W7 299 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-223ENST00000533079 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
CAPN1-223ENST00000533079 Q3C1V9 767 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 LBX2Q6XYB7 198 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 SYMPKQ92797 1274 aaKnown RBP15.28■□□□□ 0.04
CAPN1-223ENST00000533079 NEUROD6Q96NK8 337 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 PRDM6Q9NQX0 595 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 IVNS1ABPQ9Y6Y0 642 aa15.28■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L15C9J2P7 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L13C9JLJ4 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L11C9JVI0 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L18D6R9N7 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L22D6RA61 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L19D6RCP7 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L20D6RJB6 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 SRGAP3O43295 1099 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 PEX10O60683 326 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 CENPBP07199 599 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-223ENST00000533079 PTPREP23469 700 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 MCAMP43121 646 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP14P54578 494 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 RTP1P59025 263 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 PPP4CP60510 307 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 USP17L24Q0WX57 530 aa15.27■□□□□ 0.04
CAPN1-223ENST00000533079 GRB14Q14449 540 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms