RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 RIOK1Q9BRS2 568 aaKnown RBP16.25■□□□□ 0.19
CAPN1-207ENST00000527189 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
CAPN1-207ENST00000527189 SERPINB13Q9UIV8 391 aa16.25■□□□□ 0.19
CAPN1-207ENST00000527189 MYPNQ86TC9 1320 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 MAGEB6P1A0A0J9YX57 407 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 USP17L10C9JJH3 530 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 PDE6AP16499 860 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 HOXA7P31268 230 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-207ENST00000527189 FAM110CQ1W6H9 321 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 SLC4A8Q2Y0W8 1093 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 CDK5RAP2Q96SN8 1893 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 LAMA3Q16787 3333 aa16.24■□□□□ 0.19
CAPN1-207ENST00000527189 GOLIM4O00461 696 aa16.23■□□□□ 0.19
CAPN1-207ENST00000527189 DLL1O00548 723 aa16.23■□□□□ 0.19
CAPN1-207ENST00000527189 GRK4P32298 578 aa16.23■□□□□ 0.19
CAPN1-207ENST00000527189 SH3TC2Q8TF17 1288 aa16.23■□□□□ 0.19
CAPN1-207ENST00000527189 DNAJC2Q99543 621 aaKnown RBP16.23■□□□□ 0.19
CAPN1-207ENST00000527189 CRNKL1Q9BZJ0 848 aaKnown RBP16.23■□□□□ 0.19
CAPN1-207ENST00000527189 PAG1Q9NWQ8 432 aa16.23■□□□□ 0.19
CAPN1-207ENST00000527189 ZBTB21Q9ULJ3 1066 aa16.23■□□□□ 0.19
CAPN1-207ENST00000527189 ZNF532Q9HCE3 1301 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 SIPA1L1O43166 1804 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 EN2P19622 333 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-207ENST00000527189 JAG1P78504 1218 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 IRF5Q13568 498 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 MTMR2Q13614 643 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 ANKRD13CQ8N6S4 541 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 SLAIN1Q8ND83 568 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 PXYLP1Q8TE99 480 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 HAUS7Q99871 368 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.194e-7■■■□□ 19
CAPN1-207ENST00000527189 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-207ENST00000527189 COLQQ9Y215 455 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-207ENST00000527189 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
CAPN1-207ENST00000527189 TNPO2O14787 897 aaKnown RBP16.21■□□□□ 0.19
CAPN1-207ENST00000527189 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-207ENST00000527189 UBXN2AP68543 259 aa16.21■□□□□ 0.19
CAPN1-207ENST00000527189 PRKCZQ05513 592 aa16.21■□□□□ 0.19
CAPN1-207ENST00000527189 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-207ENST00000527189 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
CAPN1-207ENST00000527189 COA7Q96BR5 231 aa16.21■□□□□ 0.19
CAPN1-207ENST00000527189 BOLA2Q9H3K6 86 aa16.21■□□□□ 0.19
CAPN1-207ENST00000527189 DCTPP1Q9H773 170 aa16.21■□□□□ 0.19
CAPN1-207ENST00000527189 UNC80Q8N2C7 3258 aa16.21■□□□□ 0.19
CAPN1-207ENST00000527189 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.18
CAPN1-207ENST00000527189 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
CAPN1-207ENST00000527189 MYH1P12882 1939 aa16.2■□□□□ 0.18
CAPN1-207ENST00000527189 GDF11O95390 407 aa16.2■□□□□ 0.18
CAPN1-207ENST00000527189 POLR3DP05423 398 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-207ENST00000527189 CAPN2P17655 700 aa16.2■□□□□ 0.18
CAPN1-207ENST00000527189 ADD2P35612 726 aa16.2■□□□□ 0.18
CAPN1-207ENST00000527189 PLCD1P51178 756 aa16.2■□□□□ 0.18
CAPN1-207ENST00000527189 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
CAPN1-207ENST00000527189 GH2P01242 217 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 FLT3LGP49771 235 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-207ENST00000527189 GABPAQ06546 454 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 UBE3CQ15386 1083 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L2Q6R6M4 530 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 GTF3C2Q8WUA4 911 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-207ENST00000527189 DCP1AQ9NPI6 582 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-207ENST00000527189 ATP8A2Q9NTI2 1148 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 MORF4L1Q9UBU8 362 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
CAPN1-207ENST00000527189 MGAMO43451 1857 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 ADCY3O60266 1144 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 GJB1P08034 283 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 USP14P54578 494 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 ABCB5Q2M3G0 1257 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 EDC3Q96F86 508 aaKnown RBP16.18■□□□□ 0.18
CAPN1-207ENST00000527189 C12orf42Q96LP6 360 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 BCL11AQ9H165 835 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
CAPN1-207ENST00000527189 BIN2Q9UBW5 565 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-207ENST00000527189 SHMT1P34896 483 aa16.17■□□□□ 0.18
CAPN1-207ENST00000527189 MTFR1Q15390 333 aa16.17■□□□□ 0.18
CAPN1-207ENST00000527189 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-207ENST00000527189 LCORLQ8N3X6 602 aa16.17■□□□□ 0.18
CAPN1-207ENST00000527189 P2RX7Q99572 595 aaKnown RBP16.17■□□□□ 0.18
CAPN1-207ENST00000527189 KIAA1683Q9H0B3 1180 aa16.17■□□□□ 0.18
CAPN1-207ENST00000527189 EMILIN3Q9NT22 766 aa16.17■□□□□ 0.18
CAPN1-207ENST00000527189 SWAP70Q9UH65 585 aa16.17■□□□□ 0.18
CAPN1-207ENST00000527189 MYCP01106 439 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-207ENST00000527189 CCL5P13501 91 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 GJA8P48165 433 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 HERVK_113P62684 666 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 SDR42E1Q8WUS8 393 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 RNF208Q9H0X6 261 aa16.16■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L15C9J2P7 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L13C9JLJ4 530 aa16.15■□□□□ 0.18
CAPN1-207ENST00000527189 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms