RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 JAG1P78504 1218 aa20.18■□□□□ 0.82
CHMP4A-203ENST00000527154 NSUN4Q96CB9 384 aaKnown RBP20.18■□□□□ 0.82
CHMP4A-203ENST00000527154 LBHD1Q9BQE6 289 aaPredicted RBP20.18■□□□□ 0.82
CHMP4A-203ENST00000527154 TTYH1Q9H313 450 aaPredicted RBP20.18■□□□□ 0.82
CHMP4A-203ENST00000527154 COPRSQ9NQ92 184 aa20.18■□□□□ 0.82
CHMP4A-203ENST00000527154 GINM1Q9NU53 330 aa20.18■□□□□ 0.82
CHMP4A-203ENST00000527154 ASNSP08243 561 aa20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 HOXC6P09630 235 aa20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 SMAD3P84022 425 aaKnown RBP20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 PDE3AQ14432 1141 aa20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 PLEKHH3Q7Z736 793 aa20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 LPAR1Q92633 364 aa20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 SIL1Q9H173 461 aa20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 DNAJC18Q9H819 358 aa20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
CHMP4A-203ENST00000527154 DNM1LO00429 736 aa20.16■□□□□ 0.82
CHMP4A-203ENST00000527154 MSCO60682 206 aa20.16■□□□□ 0.82
CHMP4A-203ENST00000527154 MAP2K5Q13163 448 aa20.16■□□□□ 0.82
CHMP4A-203ENST00000527154 SNX17Q15036 470 aa20.16■□□□□ 0.82
CHMP4A-203ENST00000527154 SYMPKQ92797 1274 aaKnown RBP20.16■□□□□ 0.82
CHMP4A-203ENST00000527154 SENP6Q9GZR1 1112 aaPredicted RBP20.16■□□□□ 0.82
CHMP4A-203ENST00000527154 DDX20Q9UHI6 824 aaKnown RBP20.16■□□□□ 0.82
CHMP4A-203ENST00000527154 TMEM265A0A087WTH1 108 aa20.15■□□□□ 0.82
CHMP4A-203ENST00000527154 SHHQ15465 462 aa20.15■□□□□ 0.82
CHMP4A-203ENST00000527154 ERICH6Q7L0X2 663 aa20.15■□□□□ 0.82
CHMP4A-203ENST00000527154 TMOD4Q9NZQ9 345 aa20.15■□□□□ 0.82
CHMP4A-203ENST00000527154 FLRT1Q9NZU1 646 aa20.15■□□□□ 0.82
CHMP4A-203ENST00000527154 PI4KBQ9UBF8 816 aa20.15■□□□□ 0.82
CHMP4A-203ENST00000527154 RLFQ13129 1914 aa20.14■□□□□ 0.81
CHMP4A-203ENST00000527154 USP17L10C9JJH3 530 aa20.14■□□□□ 0.81
CHMP4A-203ENST00000527154 CNMDO75829 334 aa20.14■□□□□ 0.81
CHMP4A-203ENST00000527154 C9orf50Q5SZB4 431 aa20.14■□□□□ 0.81
CHMP4A-203ENST00000527154 C12orf42Q96LP6 360 aa20.14■□□□□ 0.81
CHMP4A-203ENST00000527154 DHX36Q9H2U1 1008 aaKnown RBP20.14■□□□□ 0.81
CHMP4A-203ENST00000527154 LDHCP07864 332 aa20.13■□□□□ 0.81
CHMP4A-203ENST00000527154 RTP1P59025 263 aa20.13■□□□□ 0.81
CHMP4A-203ENST00000527154 TIMM10P62072 90 aa20.13■□□□□ 0.81
CHMP4A-203ENST00000527154 SSH1Q8WYL5 1049 aa20.13■□□□□ 0.81
CHMP4A-203ENST00000527154 EMILIN3Q9NT22 766 aa20.13■□□□□ 0.81
CHMP4A-203ENST00000527154 PA2G4Q9UQ80 394 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-203ENST00000527154 GSTO1P78417 241 aa20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 C1orf53Q5VUE5 145 aa20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 LBX2Q6XYB7 198 aa20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 MYLIPQ8WY64 445 aa20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 XAGE2Q96GT9 111 aa20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 HMG20BQ9P0W2 317 aa20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 RABGAP1Q9Y3P9 1069 aa20.12■□□□□ 0.81
CHMP4A-203ENST00000527154 A0A1B0GUL7 405 aa20.11■□□□□ 0.81
CHMP4A-203ENST00000527154 GRB14Q14449 540 aa20.11■□□□□ 0.81
CHMP4A-203ENST00000527154 SHROOM1Q2M3G4 852 aaPredicted RBP20.11■□□□□ 0.81
CHMP4A-203ENST00000527154 MFSD14CQ5VZR4 134 aa20.11■□□□□ 0.81
CHMP4A-203ENST00000527154 TRPV1Q8NER1 839 aa20.11■□□□□ 0.81
CHMP4A-203ENST00000527154 SLC15A5A6NIM6 579 aa20.1■□□□□ 0.81
CHMP4A-203ENST00000527154 CYBAP13498 195 aa20.1■□□□□ 0.81
CHMP4A-203ENST00000527154 PTPREP23469 700 aa20.1■□□□□ 0.81
CHMP4A-203ENST00000527154 ATN1P54259 1190 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-203ENST00000527154 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
CHMP4A-203ENST00000527154 ZBTB21Q9ULJ3 1066 aa20.1■□□□□ 0.81
CHMP4A-203ENST00000527154 UBTFL1P0CB47 393 aaPredicted RBP20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 PPP4CP60510 307 aa20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 SLC39A5Q6ZMH5 540 aa20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 FOXP4Q8IVH2 680 aaPredicted RBP20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 TEX11Q8IYF3 940 aa20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 PDLIM7Q9NR12 457 aa20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 PRKAG2Q9UGJ0 569 aa20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.09■□□□□ 0.81
CHMP4A-203ENST00000527154 COL9A1P20849 921 aa20.08■□□□□ 0.81
CHMP4A-203ENST00000527154 PI16Q6UXB8 463 aa20.08■□□□□ 0.81
CHMP4A-203ENST00000527154 SPATA5Q8NB90 893 aa20.08■□□□□ 0.81
CHMP4A-203ENST00000527154 NPLOC4Q8TAT6 608 aa20.08■□□□□ 0.81
CHMP4A-203ENST00000527154 SH3RF3Q8TEJ3 882 aaPredicted RBP20.08■□□□□ 0.81
CHMP4A-203ENST00000527154 PAGR1Q9BTK6 254 aa20.08■□□□□ 0.81
CHMP4A-203ENST00000527154 AKAP2Q9Y2D5 859 aa20.08■□□□□ 0.81
CHMP4A-203ENST00000527154 GLRX3O76003 335 aaKnown RBP20.07■□□□□ 0.8
CHMP4A-203ENST00000527154 FOSL2P15408 326 aa20.07■□□□□ 0.8
CHMP4A-203ENST00000527154 CCNA1P78396 465 aa20.07■□□□□ 0.8
CHMP4A-203ENST00000527154 TJAP1Q5JTD0 557 aa20.07■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L2Q6R6M4 530 aa20.07■□□□□ 0.8
CHMP4A-203ENST00000527154 TBC1D9Q6ZT07 1266 aa20.07■□□□□ 0.8
CHMP4A-203ENST00000527154 BADQ92934 168 aa20.07■□□□□ 0.8
CHMP4A-203ENST00000527154 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 FLT1P17948 1338 aa20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 TRIM43BA6NCK2 446 aa20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 MTX1Q13505 466 aa20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 OLFML2BQ68BL8 750 aa20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 TRIM43Q96BQ3 446 aaPredicted RBP20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 FOCADQ5VW36 1801 aa20.06■□□□□ 0.8
CHMP4A-203ENST00000527154 TNFRSF10AO00220 468 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 CYP2C19P33261 490 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 TFCP2Q12800 502 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 ALDH1L2Q3SY69 923 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 CATSPERGQ6ZRH7 1159 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 USP38Q8NB14 1042 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 ARRDC4Q8NCT1 418 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 ATP11BQ9Y2G3 1177 aa20.05■□□□□ 0.8
CHMP4A-203ENST00000527154 USP17L15C9J2P7 530 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms