RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 GINM1Q9NU53 330 aa23.09■■□□□ 1.29
FBXO28-205ENST00000523990 ZBTB21Q9ULJ3 1066 aa23.09■■□□□ 1.29
FBXO28-205ENST00000523990 SLC45A1Q9Y2W3 748 aa23.09■■□□□ 1.29
FBXO28-205ENST00000523990 SUPT16HQ9Y5B9 1047 aaKnown RBP23.09■■□□□ 1.29
FBXO28-205ENST00000523990 TNRC18O15417 2968 aaPredicted RBP23.09■■□□□ 1.29
FBXO28-205ENST00000523990 MX1P20591 662 aa23.08■■□□□ 1.29
FBXO28-205ENST00000523990 PROCA1Q8NCQ7 364 aaPredicted RBP23.08■■□□□ 1.29
FBXO28-205ENST00000523990 PUS7LQ9H0K6 701 aaKnown RBP23.08■■□□□ 1.29
FBXO28-205ENST00000523990 MCM9Q9NXL9 1143 aa23.08■■□□□ 1.29
FBXO28-205ENST00000523990 ERC2O15083 957 aa23.08■■□□□ 1.28
FBXO28-205ENST00000523990 GLRX3O76003 335 aaKnown RBP23.08■■□□□ 1.28
FBXO28-205ENST00000523990 POLR3DP05423 398 aaPredicted RBP23.08■■□□□ 1.28
FBXO28-205ENST00000523990 GABPAQ06546 454 aa23.08■■□□□ 1.28
FBXO28-205ENST00000523990 ANKRD45Q5TZF3 282 aa23.08■■□□□ 1.28
FBXO28-205ENST00000523990 WDR18Q9BV38 432 aa23.08■■□□□ 1.28
FBXO28-205ENST00000523990 EFCC1Q9HA90 598 aa23.08■■□□□ 1.28
FBXO28-205ENST00000523990 AGTPBP1Q9UPW5 1226 aa23.08■■□□□ 1.28
FBXO28-205ENST00000523990 PRKAB2O43741 272 aa23.07■■□□□ 1.28
FBXO28-205ENST00000523990 CYP2C8P10632 490 aa23.07■■□□□ 1.28
FBXO28-205ENST00000523990 EVX2Q03828 476 aa23.07■■□□□ 1.28
FBXO28-205ENST00000523990 TREML2Q5T2D2 321 aa23.07■■□□□ 1.28
FBXO28-205ENST00000523990 ATP8A2Q9NTI2 1148 aa23.07■■□□□ 1.28
FBXO28-205ENST00000523990 CPA4Q9UI42 421 aa23.07■■□□□ 1.28
FBXO28-205ENST00000523990 SHMT1P34896 483 aa23.06■■□□□ 1.28
FBXO28-205ENST00000523990 HMGCS2P54868 508 aa23.06■■□□□ 1.28
FBXO28-205ENST00000523990 LACTBP83111 547 aaPredicted RBP23.06■■□□□ 1.28
FBXO28-205ENST00000523990 SH3D19Q5HYK7 790 aa23.06■■□□□ 1.28
FBXO28-205ENST00000523990 ZBTB47Q9UFB7 747 aaPredicted RBP23.06■■□□□ 1.28
FBXO28-205ENST00000523990 MKI67P46013 3256 aaKnown RBP23.05■■□□□ 1.28
FBXO28-205ENST00000523990 MTMR2Q13614 643 aa23.05■■□□□ 1.28
FBXO28-205ENST00000523990 RBBP6Q7Z6E9 1792 aaKnown RBP23.05■■□□□ 1.28
FBXO28-205ENST00000523990 GH2P01242 217 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 CYP2D6P10635 497 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 BCRP11274 1271 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 BACE1P56817 501 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
FBXO28-205ENST00000523990 SMC5Q8IY18 1101 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 APPBP2Q92624 585 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 ARHGAP39Q9C0H5 1083 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 PTPN22Q9Y2R2 807 aa23.04■■□□□ 1.28
FBXO28-205ENST00000523990 RNF113AO15541 343 aaKnown RBP23.03■■□□□ 1.28
FBXO28-205ENST00000523990 ZFYP08048 801 aaPredicted RBP23.03■■□□□ 1.28
FBXO28-205ENST00000523990 OSBP2Q969R2 916 aa23.03■■□□□ 1.28
FBXO28-205ENST00000523990 RWDD1Q9H446 243 aaPredicted RBP23.03■■□□□ 1.28
FBXO28-205ENST00000523990 SLC4A4Q9Y6R1 1079 aa23.03■■□□□ 1.28
FBXO28-205ENST00000523990 KIF22Q14807 665 aa23.02■■□□□ 1.28
FBXO28-205ENST00000523990 ARHGEF6Q15052 776 aa23.02■■□□□ 1.28
FBXO28-205ENST00000523990 STAP2Q9UGK3 403 aa23.02■■□□□ 1.28
FBXO28-205ENST00000523990 USP17L10C9JJH3 530 aa23.01■■□□□ 1.27
FBXO28-205ENST00000523990 CTGFP29279 349 aa23.01■■□□□ 1.27
FBXO28-205ENST00000523990 ABCB5Q2M3G0 1257 aa23.01■■□□□ 1.27
FBXO28-205ENST00000523990 STRBPQ96SI9 672 aaKnown RBP23.01■■□□□ 1.27
FBXO28-205ENST00000523990 PNMA3Q9UL41 463 aa23.01■■□□□ 1.27
FBXO28-205ENST00000523990 GREB1LQ9C091 1923 aaPredicted RBP23.01■■□□□ 1.27
FBXO28-205ENST00000523990 IGHDP01880 384 aa23■■□□□ 1.27
FBXO28-205ENST00000523990 PDE1AP54750 535 aa23■■□□□ 1.27
FBXO28-205ENST00000523990 LRRFIP1Q32MZ4 808 aaKnown RBP23■■□□□ 1.27
FBXO28-205ENST00000523990 SLC44A5Q8NCS7 719 aa23■■□□□ 1.27
FBXO28-205ENST00000523990 SMCR8Q8TEV9 937 aaPredicted RBP23■■□□□ 1.27
FBXO28-205ENST00000523990 LNPKQ9C0E8 428 aa23■■□□□ 1.27
FBXO28-205ENST00000523990 TAOK2Q9UL54 1235 aa23■■□□□ 1.27
FBXO28-205ENST00000523990 CYP2D7A0A087X1C5 515 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 C19orf81C9J6K1 198 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 PABPC4Q13310 644 aaKnown RBP eCLIP22.99■■□□□ 1.27
FBXO28-205ENST00000523990 RAB3GAP1Q15042 981 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 C12orf60Q5U649 245 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 DDRGK1Q96HY6 314 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 FSD1Q9BTV5 496 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 SWAP70Q9UH65 585 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 USP17L12C9JPN9 530 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 USP17L21D6R901 530 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 SMIM22K7EJ46 135 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 M0R2C6 588 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 GPAA1O43292 621 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 GNRH1P01148 92 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 GUCY1A2P33402 732 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 AMOTL1Q8IY63 956 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 DYNLL2Q96FJ2 89 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 TRIM47Q96LD4 638 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 CABP5Q9NP86 173 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 TMOD4Q9NZQ9 345 aa22.99■■□□□ 1.27
FBXO28-205ENST00000523990 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
FBXO28-205ENST00000523990 PSMC4P43686 418 aa22.98■■□□□ 1.27
FBXO28-205ENST00000523990 B4GALNT3Q6L9W6 998 aa22.98■■□□□ 1.27
FBXO28-205ENST00000523990 CTR9Q6PD62 1173 aa22.98■■□□□ 1.27
FBXO28-205ENST00000523990 ASCC2Q9H1I8 757 aaPredicted RBP22.98■■□□□ 1.27
FBXO28-205ENST00000523990 ARPP21Q9UBL0 812 aaPredicted RBP22.98■■□□□ 1.27
FBXO28-205ENST00000523990 PTCH2Q9Y6C5 1203 aa22.98■■□□□ 1.27
FBXO28-205ENST00000523990 GSG1L2A8MUP6 293 aa22.97■■□□□ 1.27
FBXO28-205ENST00000523990 ECM2O94769 699 aaPredicted RBP22.97■■□□□ 1.27
FBXO28-205ENST00000523990 RGS19P49795 217 aa22.97■■□□□ 1.27
FBXO28-205ENST00000523990 SOX10P56693 466 aa22.97■■□□□ 1.27
FBXO28-205ENST00000523990 PARP14Q460N5 1801 aa22.96■■□□□ 1.27
FBXO28-205ENST00000523990 HOXA7P31268 230 aaPredicted RBP22.96■■□□□ 1.27
FBXO28-205ENST00000523990 GIMAP6Q6P9H5 292 aa22.96■■□□□ 1.27
FBXO28-205ENST00000523990 USP17L2Q6R6M4 530 aa22.96■■□□□ 1.27
FBXO28-205ENST00000523990 C16orf86Q6ZW13 317 aa22.96■■□□□ 1.27
FBXO28-205ENST00000523990 C12orf42Q96LP6 360 aa22.96■■□□□ 1.27
FBXO28-205ENST00000523990 SEC62Q99442 399 aaKnown RBP22.96■■□□□ 1.27
FBXO28-205ENST00000523990 EPB41L4AQ9HCS5 686 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms