RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 RUFY2Q8WXA3 655 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 ZNF396Q96N95 335 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-217ENST00000522117 MTA3Q9BTC8 594 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 NCKAP5LQ9HCH0 1330 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 DNM1LO00429 736 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 MGRN1O60291 552 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 EPB41P11171 864 aaKnown RBP13.56□□□□□ -0.24
SPIDR-217ENST00000522117 NAA16Q6N069 864 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-217ENST00000522117 TXNDC2Q86VQ3 553 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 NCAPG2Q86XI2 1143 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 ACSBG1Q96GR2 724 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 NUP58Q9BVL2 599 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 YIPF3Q9GZM5 350 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 SIL1Q9H173 461 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 CORO1CQ9ULV4 474 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-217ENST00000522117 ZNF232Q9UNY5 417 aa13.56□□□□□ -0.24
SPIDR-217ENST00000522117 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 ERICH2A1L162 156 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 MYO1BO43795 1136 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 A1BGP04217 495 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 LSP1P33241 339 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 FOSBP53539 338 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 STK24Q9Y6E0 443 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 SPDYE3A6NKU9 549 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 CSB-PGBD3P0DP91 1061 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 NAT1P18440 290 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 HDLBPQ00341 1268 aaKnown RBP13.55□□□□□ -0.24
SPIDR-217ENST00000522117 MAP4K1Q92918 833 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 STAMBPL1Q96FJ0 436 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 PCDHGA4Q9Y5G9 962 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 LINGO3P0C6S8 592 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 IFFO1Q0D2I5 559 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 RASGRP2Q7LDG7 609 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 MFN1Q8IWA4 741 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 AENQ8WTP8 325 aaKnown RBP13.55□□□□□ -0.24
SPIDR-217ENST00000522117 TBC1D5Q92609 795 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 SPAG5Q96R06 1193 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 TBC1D2BQ9UPU7 963 aa13.55□□□□□ -0.24
SPIDR-217ENST00000522117 CAPN15O75808 1086 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 SLC30A9Q6PML9 568 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 SPATA21Q7Z572 469 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-217ENST00000522117 PANX2Q96RD6 677 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 G3BP2Q9UN86 482 aaKnown RBP13.54□□□□□ -0.24
SPIDR-217ENST00000522117 PES1O00541 588 aaKnown RBP13.54□□□□□ -0.24
SPIDR-217ENST00000522117 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 HHATQ5VTY9 493 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 MYCBPAPQ8TBZ2 947 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 CCT8L2Q96SF2 557 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 OSBPL7Q9BZF2 842 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
SPIDR-217ENST00000522117 NRXN3Q9Y4C0 1643 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 ATP6V1G2O95670 118 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 IMPDH2P12268 514 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 CDC25CP30307 473 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 ATP1A2P50993 1020 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 XRCC4Q13426 336 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 PTGISQ16647 500 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 NLRP14Q86W24 1093 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 CCDC47Q96A33 483 aaKnown RBP13.53□□□□□ -0.24
SPIDR-217ENST00000522117 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 NOD2Q9HC29 1040 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 Q6ZUG5 572 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 RRP36Q96EU6 259 aaKnown RBP13.53□□□□□ -0.24
SPIDR-217ENST00000522117 RBM33Q96EV2 1170 aaKnown RBP13.53□□□□□ -0.24
SPIDR-217ENST00000522117 RNPC3Q96LT9 517 aaKnown RBP13.53□□□□□ -0.24
SPIDR-217ENST00000522117 ZNF570Q96NI8 536 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 OSBPL9Q96SU4 736 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 EPAS1Q99814 870 aa13.53□□□□□ -0.24
SPIDR-217ENST00000522117 NUTM2FA1L443 756 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 OPA1O60313 960 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 FBLN1P23142 703 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 USP4Q13107 963 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 ANKRD20A8PQ5CZ79 823 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 CCDC121Q6ZUS5 278 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 TBC1D31Q96DN5 1066 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 C19orf44Q9H6X5 657 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 RMI1Q9H9A7 625 aa13.52□□□□□ -0.24
SPIDR-217ENST00000522117 USP42Q9H9J4 1324 aaKnown RBP13.52□□□□□ -0.25
SPIDR-217ENST00000522117 KIF20BQ96Q89 1820 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 KDM6AO15550 1401 aaPredicted RBP13.52□□□□□ -0.25
SPIDR-217ENST00000522117 AKR1B15C9JRZ8 316 aaPredicted RBP13.52□□□□□ -0.25
SPIDR-217ENST00000522117 CHL1O00533 1208 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 CDKL5O76039 1030 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 PAPOLAP51003 745 aaKnown RBP13.52□□□□□ -0.25
SPIDR-217ENST00000522117 SEC24CP53992 1094 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 GUCY1A3Q02108 690 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 HSP90AA4PQ58FG1 418 aa13.52□□□□□ -0.25
SPIDR-217ENST00000522117 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms