RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 ATF7IPQ6VMQ6 1270 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 USP50Q70EL3 339 aaPredicted RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 STAG2Q8N3U4 1231 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 PANK1Q8TE04 598 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 ZDHHC1Q8WTX9 485 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 MASTLQ96GX5 879 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 INSM2Q96T92 566 aaPredicted RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 TSEN34Q9BSV6 310 aaKnown RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 POLMQ9NP87 494 aaPredicted RBP4.94□□□□□ -1.62
PVT1-211ENST00000521600 TAF1P21675 1872 aa4.94□□□□□ -1.62
PVT1-211ENST00000521600 DLG5Q8TDM6 1919 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 NUP98P52948 1817 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 FAM187AA6NFU0 413 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 UPP2O95045 317 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 HSP90AB1P08238 724 aaKnown RBP4.93□□□□□ -1.62
PVT1-211ENST00000521600 MAPK1P28482 360 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 HIRAP54198 1017 aaPredicted RBP4.93□□□□□ -1.62
PVT1-211ENST00000521600 HUNKP57058 714 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 ECM1Q16610 540 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 SOGA3Q5TF21 947 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 DNAJC14Q6Y2X3 702 aaPredicted RBP4.93□□□□□ -1.62
PVT1-211ENST00000521600 ALDH16A1Q8IZ83 802 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 ZNF295-AS1Q8N0V1 137 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 RHBDD1Q8TEB9 315 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 ARHGAP45Q92619 1136 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 TSR2Q969E8 191 aaKnown RBP4.93□□□□□ -1.62
PVT1-211ENST00000521600 CSRNP1Q96S65 589 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 NIFKQ9BYG3 293 aaKnown RBP4.93□□□□□ -1.62
PVT1-211ENST00000521600 UPF2Q9HAU5 1272 aaKnown RBP4.93□□□□□ -1.62
PVT1-211ENST00000521600 LRFN2Q9ULH4 789 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 PDZRN3Q9UPQ7 1066 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 LAMB1P07942 1786 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 LAMB2P55268 1798 aa4.93□□□□□ -1.62
PVT1-211ENST00000521600 SHTN1A0MZ66 631 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 SPINT1O43278 529 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 IGHDP01880 384 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 HMOX1P09601 288 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 RLBP1P12271 317 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 BMP2P12643 396 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 GPC1P35052 558 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 CTSOP43234 321 aaPredicted RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 PLA2G4AP47712 749 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 RBM25P49756 843 aaKnown RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 RGS3P49796 1198 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 RNF144AP50876 292 aaPredicted RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 EIF5P55010 431 aaKnown RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 SLC39A6Q13433 755 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 HDAC1Q13547 482 aaPredicted RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 EIF4A2Q14240 407 aaKnown RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 C8orf34Q49A92 452 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 PLEKHO1Q53GL0 409 aaPredicted RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 NOM1Q5C9Z4 860 aaKnown RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 AKAP4Q5JQC9 854 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 GNASQ5JWF2 1037 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 C6orf118Q5T5N4 469 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 ZNF530Q6P9A1 599 aaPredicted RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 ITPRIPQ8IWB1 547 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 CNBD1Q8NA66 436 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 TRPM4Q8TD43 1214 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 SSH1Q8WYL5 1049 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 BCL2L13Q9BXK5 485 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 PHACTR1Q9C0D0 580 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 GRIP2Q9C0E4 1043 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 GPRC5DQ9NZD1 345 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 PGAP2Q9UHJ9 254 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 NOB1Q9ULX3 412 aaKnown RBP4.92□□□□□ -1.62
PVT1-211ENST00000521600 SCN9AQ15858 1988 aa4.92□□□□□ -1.62
PVT1-211ENST00000521600 ALPK3Q96L96 1907 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 ZSWIM8A7E2V4 1837 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 TNFRSF10BO14763 440 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 EIF5BO60841 1220 aaKnown RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 FAM13AO94988 1023 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 ZNF853P0CG23 659 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 TRIM27P14373 513 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 TXLNAP40222 546 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 PHKA2P46019 1235 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 EIF6P56537 245 aaKnown RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 ARHGAP4P98171 946 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 C4orf17Q53FE4 359 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 C1orf141Q5JVX7 400 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 RGMBQ6NW40 437 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 MRPL14Q6P1L8 145 aaKnown RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 FBXO46Q6PJ61 603 aaPredicted RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 ZNF296Q8WUU4 475 aaPredicted RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 MYO19Q96H55 970 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 PHACTR3Q96KR7 559 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 API5Q9BZZ5 524 aaKnown RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 ADARB2Q9NS39 739 aaKnown RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 DCTN4Q9UJW0 460 aa4.91□□□□□ -1.62
PVT1-211ENST00000521600 LAS1LQ9Y4W2 734 aaKnown RBP4.91□□□□□ -1.62
PVT1-211ENST00000521600 CDH23Q9H251 3354 aa4.9□□□□□ -1.62
PVT1-211ENST00000521600 KLRG2A4D1S0 409 aaPredicted RBP4.9□□□□□ -1.63
PVT1-211ENST00000521600 ANKRD33BA6NCL7 494 aa4.9□□□□□ -1.63
PVT1-211ENST00000521600 NPHP1O15259 732 aa4.9□□□□□ -1.63
PVT1-211ENST00000521600 VAMP4O75379 141 aa4.9□□□□□ -1.63
PVT1-211ENST00000521600 CAMTA2O94983 1202 aa4.9□□□□□ -1.63
PVT1-211ENST00000521600 TBC1D8O95759 1140 aa4.9□□□□□ -1.63
PVT1-211ENST00000521600 BMP1P13497 986 aa4.9□□□□□ -1.63
PVT1-211ENST00000521600 NPR1P16066 1061 aa4.9□□□□□ -1.63
PVT1-211ENST00000521600 NPR3P17342 541 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms