RNA–Protein interactions for RNA: ENST00000517835.1

CDH12P4-201, Transcript of cadherin 12 pseudogene 4, humanhuman

BASIC

Gene CDH12P4, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P4-201ENST00000517835 CLCN1P35523 988 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 EIF4G2P78344 907 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 GTF2IP78347 998 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 SNX17Q15036 470 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 SKIV2LQ15477 1246 aaKnown RBP6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 RAB30Q15771 203 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 PKN1Q16512 942 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 FAM110CQ1W6H9 321 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 C1orf53Q5VUE5 145 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 NYAP1Q6ZVC0 841 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 GJD3Q8N144 294 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 SMCR8Q8TEV9 937 aaPredicted RBP6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 TRIB2Q92519 343 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 RTF1Q92541 710 aaKnown RBP6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 HLA-CQ95604 372 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 FAM89AQ96GI7 184 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 PRDM5Q9NQX1 630 aaPredicted RBP6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 ZNF70Q9UC06 446 aaPredicted RBP6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 ATP11BQ9Y2G3 1177 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
CDH12P4-201ENST00000517835 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 USP24Q9UPU5 2620 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 TRIM43BA6NCK2 446 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 DCXO43602 365 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 MSCO60682 206 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 ID4P47928 161 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 EPHB4P54760 987 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 FPGSQ05932 587 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 CACNB2Q08289 660 aaPredicted RBP6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 COL9A2Q14055 689 aaPredicted RBP6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 ACAP1Q15027 740 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 DCAF15Q66K64 600 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 COPS6Q7L5N1 327 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 TRIM43Q96BQ3 446 aaPredicted RBP6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 TMEM39BQ9GZU3 492 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 SLC28A3Q9HAS3 691 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 SEC31BQ9NQW1 1179 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 PDLIM7Q9NR12 457 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 MSRAQ9UJ68 235 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 SERPINA10Q9UK55 444 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 LEMD3Q9Y2U8 911 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 PTPRZ1P23471 2315 aaPredicted RBP6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 RIF1Q5UIP0 2472 aaKnown RBP6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 DMDP11532 3685 aa6.55□□□□□ -1.36
CDH12P4-201ENST00000517835 ARAP2Q8WZ64 1704 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 DDX11L8A8MPP1 907 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 PROB1E7EW31 1015 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 IRS4O14654 1257 aaPredicted RBP6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 CCT4P50991 539 aaKnown RBP6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 EIF4A1P60842 406 aaKnown RBP6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 TRIM28Q13263 835 aaKnown RBP6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 CCDC152Q4G0S7 254 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 RASIP1Q5U651 963 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 CCDC174Q6PII3 467 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 SLC39A5Q6ZMH5 540 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 CCDC129Q6ZRS4 1044 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 HFE2Q6ZVN8 426 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 ANKRD18AQ8IVF6 992 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 CERS5Q8N5B7 392 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 RDH13Q8NBN7 331 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 PRSS33Q8NF86 280 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 LPAR1Q92633 364 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 GPCPD1Q9NPB8 672 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 FASNP49327 2511 aaKnown RBP6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 TPRP12270 2363 aaKnown RBP6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 GVINP1Q7Z2Y8 2422 aa6.54□□□□□ -1.36
CDH12P4-201ENST00000517835 AOX1Q06278 1338 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 A0A0G2JLL6 359 aaPredicted RBP6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 KIAA0355O15063 1070 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 ZKSCAN1P17029 563 aaPredicted RBP6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 GCLCP48506 637 aaPredicted RBP6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 AMHR2Q16671 573 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 KMT5BQ4FZB7 885 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 MCM10Q7L590 875 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 PRRT2Q7Z6L0 340 aaPredicted RBP6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 TXNRD3Q86VQ6 643 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 ANKRD13CQ8N6S4 541 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 ARRDC4Q8NCT1 418 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 SOCS4Q8WXH5 440 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 PRR14Q9BWN1 585 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 ZNF341Q9BYN7 854 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 BSDC1Q9NW68 430 aaPredicted RBP6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 ZNF112Q9UJU3 913 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 MINPP1Q9UNW1 487 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 BPTFQ12830 3046 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 ATRNL1Q5VV63 1379 aa6.53□□□□□ -1.36
CDH12P4-201ENST00000517835 TCP10L2B9ZVM9 353 aa6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 RAG1P15918 1043 aa6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 CCND3P30281 292 aaPredicted RBP6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 PDE4DQ08499 809 aa6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 TRIM60Q495X7 471 aa6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 NOL9Q5SY16 702 aaKnown RBP6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 FKBP1CQ5VVH2 108 aa6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 SH3RF1Q7Z6J0 888 aa6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 FAM83AQ86UY5 434 aa6.52□□□□□ -1.37
CDH12P4-201ENST00000517835 MICALL1Q8N3F8 863 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms