RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SDR42E1Q8WUS8 393 aa29.69■■■□□ 2.34
PVT1-204ENST00000517525 PTPRFP10586 1907 aa29.69■■■□□ 2.34
PVT1-204ENST00000517525 GNRH1P01148 92 aa29.68■■■□□ 2.34
PVT1-204ENST00000517525 POLR3DP05423 398 aaPredicted RBP29.68■■■□□ 2.34
PVT1-204ENST00000517525 LACTBP83111 547 aaPredicted RBP29.68■■■□□ 2.34
PVT1-204ENST00000517525 SMC5Q8IY18 1101 aa29.68■■■□□ 2.34
PVT1-204ENST00000517525 PUS7LQ9H0K6 701 aaKnown RBP29.68■■■□□ 2.34
PVT1-204ENST00000517525 RWDD1Q9H446 243 aaPredicted RBP29.68■■■□□ 2.34
PVT1-204ENST00000517525 STAP2Q9UGK3 403 aa29.68■■■□□ 2.34
PVT1-204ENST00000517525 C19orf81C9J6K1 198 aa29.67■■■□□ 2.34
PVT1-204ENST00000517525 CHGBP05060 677 aa29.67■■■□□ 2.34
PVT1-204ENST00000517525 BCRP11274 1271 aa29.67■■■□□ 2.34
PVT1-204ENST00000517525 SHMT1P34896 483 aa29.67■■■□□ 2.34
PVT1-204ENST00000517525 RGS19P49795 217 aa29.67■■■□□ 2.34
PVT1-204ENST00000517525 BACE1P56817 501 aa29.67■■■□□ 2.34
PVT1-204ENST00000517525 LRRFIP1Q32MZ4 808 aaKnown RBP29.67■■■□□ 2.34
PVT1-204ENST00000517525 ZBTB47Q9UFB7 747 aaPredicted RBP29.67■■■□□ 2.34
PVT1-204ENST00000517525 PTPN22Q9Y2R2 807 aa29.67■■■□□ 2.34
PVT1-204ENST00000517525 RNF113AO15541 343 aaKnown RBP29.66■■■□□ 2.34
PVT1-204ENST00000517525 GDF11O95390 407 aa29.66■■■□□ 2.34
PVT1-204ENST00000517525 EXOC6Q8TAG9 804 aa29.66■■■□□ 2.34
PVT1-204ENST00000517525 APPBP2Q92624 585 aa29.66■■■□□ 2.34
PVT1-204ENST00000517525 SUPT16HQ9Y5B9 1047 aaKnown RBP29.66■■■□□ 2.34
PVT1-204ENST00000517525 PRKAB2O43741 272 aa29.65■■■□□ 2.34
PVT1-204ENST00000517525 CYP2C8P10632 490 aa29.65■■■□□ 2.34
PVT1-204ENST00000517525 KIF22Q14807 665 aa29.65■■■□□ 2.34
PVT1-204ENST00000517525 SLC4A8Q2Y0W8 1093 aa29.65■■■□□ 2.34
PVT1-204ENST00000517525 CERKLQ49MI3 558 aaPredicted RBP29.65■■■□□ 2.34
PVT1-204ENST00000517525 STRBPQ96SI9 672 aaKnown RBP29.65■■■□□ 2.34
PVT1-204ENST00000517525 CPA4Q9UI42 421 aa29.65■■■□□ 2.34
PVT1-204ENST00000517525 ATAD5Q96QE3 1844 aa29.65■■■□□ 2.34
PVT1-204ENST00000517525 MYH7P12883 1935 aa29.65■■■□□ 2.34
PVT1-204ENST00000517525 GH2P01242 217 aa29.64■■■□□ 2.34
PVT1-204ENST00000517525 HMGCS2P54868 508 aa29.64■■■□□ 2.34
PVT1-204ENST00000517525 PABPC4Q13310 644 aaKnown RBP eCLIP29.64■■■□□ 2.34
PVT1-204ENST00000517525 SWAP70Q9UH65 585 aa29.64■■■□□ 2.34
PVT1-204ENST00000517525 PNMA3Q9UL41 463 aa29.64■■■□□ 2.34
PVT1-204ENST00000517525 USP17L10C9JJH3 530 aa29.63■■■□□ 2.33
PVT1-204ENST00000517525 SHROOM1Q2M3G4 852 aaPredicted RBP29.63■■■□□ 2.33
PVT1-204ENST00000517525 TREML2Q5T2D2 321 aa29.63■■■□□ 2.33
PVT1-204ENST00000517525 C12orf60Q5U649 245 aa29.63■■■□□ 2.33
PVT1-204ENST00000517525 GIMAP6Q6P9H5 292 aa29.63■■■□□ 2.33
PVT1-204ENST00000517525 HOXA7P31268 230 aaPredicted RBP29.62■■■□□ 2.33
PVT1-204ENST00000517525 PRMT2P55345 433 aa29.62■■■□□ 2.33
PVT1-204ENST00000517525 ABCB5Q2M3G0 1257 aa29.62■■■□□ 2.33
PVT1-204ENST00000517525 TICAM2Q86XR7 235 aa29.62■■■□□ 2.33
PVT1-204ENST00000517525 OSBP2Q969R2 916 aa29.62■■■□□ 2.33
PVT1-204ENST00000517525 DDRGK1Q96HY6 314 aa29.62■■■□□ 2.33
PVT1-204ENST00000517525 SLC4A4Q9Y6R1 1079 aa29.62■■■□□ 2.33
PVT1-204ENST00000517525 LOC285556D6RIA3 1793 aa29.62■■■□□ 2.33
PVT1-204ENST00000517525 NAV1Q8NEY1 1877 aa29.61■■■□□ 2.33
PVT1-204ENST00000517525 MTMR2Q13614 643 aa29.61■■■□□ 2.33
PVT1-204ENST00000517525 CABP5Q9NP86 173 aa29.61■■■□□ 2.33
PVT1-204ENST00000517525 PDE1AP54750 535 aa29.6■■■□□ 2.33
PVT1-204ENST00000517525 TMOD4Q9NZQ9 345 aa29.6■■■□□ 2.33
PVT1-204ENST00000517525 USP17L12C9JPN9 530 aa29.59■■■□□ 2.33
PVT1-204ENST00000517525 USP17L21D6R901 530 aa29.59■■■□□ 2.33
PVT1-204ENST00000517525 CYP2D6P10635 497 aa29.59■■■□□ 2.33
PVT1-204ENST00000517525 AMOTL1Q8IY63 956 aa29.59■■■□□ 2.33
PVT1-204ENST00000517525 ARMC5Q96C12 935 aa29.59■■■□□ 2.33
PVT1-204ENST00000517525 C12orf42Q96LP6 360 aa29.59■■■□□ 2.33
PVT1-204ENST00000517525 ARHGAP39Q9C0H5 1083 aa29.59■■■□□ 2.33
PVT1-204ENST00000517525 IGHDP01880 384 aa29.58■■■□□ 2.33
PVT1-204ENST00000517525 GNAT2P19087 354 aa29.58■■■□□ 2.33
PVT1-204ENST00000517525 GCLCP48506 637 aaPredicted RBP29.58■■■□□ 2.33
PVT1-204ENST00000517525 EVX2Q03828 476 aa29.58■■■□□ 2.33
PVT1-204ENST00000517525 SBK1Q52WX2 424 aa29.58■■■□□ 2.33
PVT1-204ENST00000517525 SMCR8Q8TEV9 937 aaPredicted RBP29.58■■■□□ 2.33
PVT1-204ENST00000517525 GSG1L2A8MUP6 293 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 OSBPP22059 807 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 CTGFP29279 349 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 GUCY1A2P33402 732 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 PSMC4P43686 418 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 CTR9Q6PD62 1173 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 USP17L2Q6R6M4 530 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 TRIM47Q96LD4 638 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 KIAA1683Q9H0B3 1180 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 EMILIN3Q9NT22 766 aa29.57■■■□□ 2.32
PVT1-204ENST00000517525 ARPP21Q9UBL0 812 aaPredicted RBP29.57■■■□□ 2.32
PVT1-204ENST00000517525 HOXD10P28358 340 aa29.56■■■□□ 2.32
PVT1-204ENST00000517525 ZMYM1Q5SVZ6 1142 aa29.56■■■□□ 2.32
PVT1-204ENST00000517525 C16orf86Q6ZW13 317 aa29.56■■■□□ 2.32
PVT1-204ENST00000517525 CCDC17Q96LX7 622 aa29.56■■■□□ 2.32
PVT1-204ENST00000517525 ASCC2Q9H1I8 757 aaPredicted RBP29.56■■■□□ 2.32
PVT1-204ENST00000517525 GPAA1O43292 621 aa29.55■■■□□ 2.32
PVT1-204ENST00000517525 USP14P54578 494 aa29.55■■■□□ 2.32
PVT1-204ENST00000517525 NUCB1Q02818 461 aa29.55■■■□□ 2.32
PVT1-204ENST00000517525 FAM110CQ1W6H9 321 aa29.55■■■□□ 2.32
PVT1-204ENST00000517525 EVI5LQ96CN4 794 aa29.55■■■□□ 2.32
PVT1-204ENST00000517525 FSD1Q9BTV5 496 aa29.55■■■□□ 2.32
PVT1-204ENST00000517525 SRRDQ9UH36 339 aa29.55■■■□□ 2.32
PVT1-204ENST00000517525 RAB3GAP1Q15042 981 aa29.54■■■□□ 2.32
PVT1-204ENST00000517525 TMEM179Q6ZVK1 233 aa29.54■■■□□ 2.32
PVT1-204ENST00000517525 DYNLL2Q96FJ2 89 aa29.54■■■□□ 2.32
PVT1-204ENST00000517525 M0R2C6 588 aa29.53■■■□□ 2.32
PVT1-204ENST00000517525 CDK8P49336 464 aa29.53■■■□□ 2.32
PVT1-204ENST00000517525 FCGRTP55899 365 aa29.53■■■□□ 2.32
PVT1-204ENST00000517525 CHD1LQ86WJ1 897 aa29.53■■■□□ 2.32
PVT1-204ENST00000517525 SLC44A5Q8NCS7 719 aa29.53■■■□□ 2.32
PVT1-204ENST00000517525 LNPKQ9C0E8 428 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms