RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 NOTCH4Q99466 2003 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 SH3D21A4FU49 640 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 FITM1A5D6W6 292 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZAR1LA6NP61 321 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 H3BS24 57 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 U2SURPO15042 1029 aaKnown RBP0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 LMNAP02545 664 aaKnown RBP0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 KRT4P19013 534 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZNF81P51508 661 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 USP4Q13107 963 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 FHL1Q13642 323 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 DIXDC1Q155Q3 683 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 C1orf53Q5VUE5 145 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 LRFN4Q6PJG9 635 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 TOP6BLQ8N6T0 577 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 GPR150Q8NGU9 434 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 IGDCC4Q8TDY8 1250 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 FNIP1Q8TF40 1166 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 DDX11Q96FC9 970 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 SPACA7Q96KW9 195 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 PHACTR1Q9C0D0 580 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 PPP4R1LQ9P1A2 415 aa0.38□□□□□ -2.35
SNORA40.16-201ENST00000517238 GPR42O15529 346 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 LAMTOR5O43504 91 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZNF623O75123 536 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 SOX18P35713 384 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 HIF1AQ16665 826 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 STRIP1Q5VSL9 837 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 CDKAL1Q5VV42 579 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 HGSNATQ68CP4 663 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 LAIR1Q6GTX8 287 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 BORAQ6PGQ7 559 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 GSG1LQ6UXU4 331 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZNF517Q6ZMY9 492 aaPredicted RBP0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 SAPCD2Q86UD0 394 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZNF761Q86XN6 746 aaPredicted RBP0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 SIRT2Q8IXJ6 389 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 ADAMTS15Q8TE58 950 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 ZNF483Q8TF39 744 aaPredicted RBP0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 PLEKHG4BQ96PX9 1271 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 HCN4Q9Y3Q4 1203 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 PCDHA5Q9Y5H7 936 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 PMF1-BGLAPU3KQ54 211 aa0.37□□□□□ -2.35
SNORA40.16-201ENST00000517238 FCGBPQ9Y6R7 5405 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 SETD1BQ9UPS6 1966 aaKnown RBP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 A0A1B0GVY2 172 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 TMEM191CA6NGB0 347 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 DNAJC9-AS1A6NH13 148 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 FAM155AB1AL88 458 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 IGF2BP3O00425 579 aaKnown RBP eCLIP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 TBC1D4O60343 1298 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 MMP20O60882 483 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 PLA2G1BP04054 148 aaKnown RBP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 MSL3P1P0C860 447 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 TUBA3CQ13748 450 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 SNX17Q15036 470 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 HS1BP3Q53T59 392 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 RTL5Q5HYW3 569 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 TBCELQ5QJ74 424 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 ATXN7L2Q5T6C5 722 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 TUBA3EQ6PEY2 450 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 TMC6Q7Z403 805 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 EXTL1Q92935 676 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 CLIP3Q96DZ5 547 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 CCDC85AQ96PX6 553 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 RASSF4Q9H2L5 321 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 RAD18Q9NS91 495 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 LRFN2Q9ULH4 789 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 AHNAK2Q8IVF2 5795 aa0.36□□□□□ -2.35
SNORA40.16-201ENST00000517238 ERI2A8K979 691 aaKnown RBP0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 PATE3B3GLJ2 98 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 ABLIM1O14639 778 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 C1SP09871 688 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 SDHBP21912 280 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 KIAA2012Q0VF49 1180 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 NR0B2Q15466 257 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 FNDC7Q5VTL7 733 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 SCARA3Q6AZY7 606 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 RD3Q7Z3Z2 195 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 FAM124AQ86V42 546 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 ULK2Q8IYT8 1036 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 WACQ9BTA9 647 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 GSX1Q9H4S2 264 aaPredicted RBP0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 PIDD1Q9HB75 910 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 SCHIP1Q9P0W5 487 aaPredicted RBP0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 FRMD4BQ9Y2L6 1034 aa0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 REXO2Q9Y3B8 237 aaKnown RBP0.35□□□□□ -2.35
SNORA40.16-201ENST00000517238 CCDC187A0A096LP49 1063 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZBBXA8MT70 800 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 PRSS47A8MTI9 375 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 NTN3O00634 580 aaPredicted RBP0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 PFKLP17858 780 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 ABCG1P45844 678 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 SARSP49591 514 aaKnown RBP0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 MCCD1P59942 119 aaPredicted RBP0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 MAP2K5Q13163 448 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 SURF1Q15526 300 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 Q6ZPA2 131 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 C1QL2Q7Z5L3 287 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 SLC9A9Q8IVB4 645 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 994 ms