RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 ZKSCAN4Q969J2 545 aaPredicted RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 KLRG1Q96E93 195 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 LSG1Q9H089 658 aaKnown RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 EPB41L4AQ9HCS5 686 aaPredicted RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TMOD4Q9NZQ9 345 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MKRN1Q9UHC7 482 aaKnown RBP6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ANAPC4Q9UJX5 808 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PASKQ96RG2 1323 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ECM29Q5VYK3 1845 aa6.43□□□□□ -1.38
SCARNA16.4-201ENST00000516956 E7EWF7 191 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SLC27A2O14975 620 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ORC4O43929 436 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 KDM4AO75164 1064 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GH2P01242 217 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CYP21A2P08686 494 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MCM5P33992 734 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ICA1Q05084 483 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PPATQ06203 517 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 VGLL4Q14135 290 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MAP3K11Q16584 847 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CST9Q5W186 159 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TATDN1Q6P1N9 297 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 BLOC1S2Q6QNY1 142 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NFXL1Q6ZNB6 911 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MOB2Q70IA6 237 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SLC44A5Q8NCS7 719 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 OTUD5Q96G74 571 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NEK1Q96PY6 1258 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 BEGAINQ9BUH8 593 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 KAT14Q9H8E8 782 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 KANSL2Q9H9L4 492 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZNF112Q9UJU3 913 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZBTB21Q9ULJ3 1066 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NAP1L2Q9ULW6 460 aaPredicted RBP6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 STX8Q9UNK0 236 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CTDP1Q9Y5B0 961 aaPredicted RBP6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TLL2Q9Y6L7 1015 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZHX2Q9Y6X8 837 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NAV1Q8NEY1 1877 aa6.42□□□□□ -1.38
SCARNA16.4-201ENST00000516956 B4E1Z4 1266 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 USP17L10C9JJH3 530 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 IFIT3O14879 490 aaKnown RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CETPP11597 493 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 AKR1B1P15121 316 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 HSPA6P17066 643 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 RASA1P20936 1047 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SHMT1P34896 483 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 HSPA4P34932 840 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GTF2A2P52657 109 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 USP14P54578 494 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MAP3K10Q02779 954 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GABPAQ06546 454 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SREBF2Q12772 1141 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MKRN3Q13064 507 aaKnown RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 IKQ13123 557 aaPredicted RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PABPC4Q13310 644 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PPIL2Q13356 520 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SNAPC2Q13487 334 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NECTIN1Q15223 517 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 FAM47AQ5JRC9 791 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NOL9Q5SY16 702 aaKnown RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 LDLRAD1Q5T700 205 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GADL1Q6ZQY3 521 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 FASTKD5Q7L8L6 764 aaKnown RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SAPCD2Q86UD0 394 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 METTL16Q86W50 562 aaKnown RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CDAN1Q8IWY9 1227 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 REM2Q8IYK8 340 aaPredicted RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TMTC2Q8N394 836 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NEDD1Q8NHV4 660 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 OPTNQ96CV9 577 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 HHIPL1Q96JK4 782 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 JAKMIP1Q96N16 626 aaKnown RBP6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 USP26Q9BXU7 913 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 C22orf23Q9BZE7 217 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 GOPCQ9HD26 462 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CLIP2Q9UDT6 1046 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 FZD1Q9UP38 647 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CYP46A1Q9Y6A2 500 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ROBO3Q96MS0 1386 aa6.41□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MYH1P12882 1939 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PAPPA2Q9BXP8 1791 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MANSC4A6NHS7 340 aaPredicted RBP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CCDC69A6NI79 296 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SPDYE5A6NIY4 337 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TRIM75PA6NK02 468 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PHF20L1A8MW92 1017 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 C19orf81C9J6K1 198 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CXCL11O14625 94 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PRC1O43663 620 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TTLL1O95922 423 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZBTB48P10074 688 aaPredicted RBP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PTPRAP18433 802 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CASTP20810 708 aaKnown RBP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 INHBEP58166 350 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ANAPC15P60006 121 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SPP2Q13103 211 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 NOGQ13253 232 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 WTAPQ15007 396 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms