RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 COL4A1P02462 1669 aa20.07■□□□□ 0.8
SNX2-213ENST00000514949 ZNF18P17022 549 aa20.07■□□□□ 0.8
SNX2-213ENST00000514949 GRIN1Q05586 938 aa20.07■□□□□ 0.8
SNX2-213ENST00000514949 PDE4BQ07343 736 aa20.07■□□□□ 0.8
SNX2-213ENST00000514949 NR5A1Q13285 461 aa20.07■□□□□ 0.8
SNX2-213ENST00000514949 BSDC1Q9NW68 430 aaPredicted RBP20.07■□□□□ 0.8
SNX2-213ENST00000514949 DUOX1Q9NRD9 1551 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 POLR2DO15514 142 aaKnown RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 PRPF3O43395 683 aaKnown RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 CFAP100Q494V2 611 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 CCDC93Q567U6 631 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 COL1A1P02452 1464 aaPredicted RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 ROBO1Q9Y6N7 1651 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 COL5A3P25940 1745 aaPredicted RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 FOXN1O15353 648 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 ACTN4O43707 911 aaKnown RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 SLU7O95391 586 aaKnown RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 XBP1P17861 261 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 TBX2Q13207 712 aaPredicted RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 PKN1Q16512 942 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 ENAHQ8N8S7 591 aaPredicted RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 ZSCAN10Q96SZ4 725 aaPredicted RBP20.06■□□□□ 0.8
SNX2-213ENST00000514949 ARID3AQ99856 593 aa20.06■□□□□ 0.8
SNX2-213ENST00000514949 AATFQ9NY61 560 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNX2-213ENST00000514949 NAA30Q147X3 362 aaPredicted RBP20.05■□□□□ 0.8
SNX2-213ENST00000514949 ANKRD18AQ8IVF6 992 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 OXER1Q8TDS5 423 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 NUP133Q8WUM0 1156 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 SDR42E1Q8WUS8 393 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
SNX2-213ENST00000514949 PHF20Q9BVI0 1012 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 INTS13Q9NVM9 706 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 RBM28Q9NW13 759 aaKnown RBP20.05■□□□□ 0.8
SNX2-213ENST00000514949 SEMA3EO15041 775 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 ZBTB22O15209 634 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 BMP15O95972 392 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 CALM1P0DP23 149 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 CALM2P0DP24 149 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 CALM3P0DP25 149 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 SPECC1Q5M775 1068 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 SMARCE1Q969G3 411 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 SHISA4Q96DD7 197 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 OGFRQ9NZT2 677 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 RAI14Q9P0K7 980 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 SERTAD1Q9UHV2 236 aa20.05■□□□□ 0.8
SNX2-213ENST00000514949 PDS5AQ29RF7 1337 aaKnown RBP20.05■□□□□ 0.8
SNX2-213ENST00000514949 SCN7AQ01118 1682 aa20.04■□□□□ 0.8
SNX2-213ENST00000514949 MINDY4BA8MYZ0 360 aa20.04■□□□□ 0.8
SNX2-213ENST00000514949 TOP1P11387 765 aaKnown RBP20.04■□□□□ 0.8
SNX2-213ENST00000514949 ERCC5P28715 1186 aaPredicted RBP20.04■□□□□ 0.8
SNX2-213ENST00000514949 ETF1P62495 437 aaKnown RBP20.04■□□□□ 0.8
SNX2-213ENST00000514949 CMTR1Q8N1G2 835 aaKnown RBP20.04■□□□□ 0.8
SNX2-213ENST00000514949 CABP5Q9NP86 173 aa20.04■□□□□ 0.8
SNX2-213ENST00000514949 MYH2Q9UKX2 1941 aa20.04■□□□□ 0.8
SNX2-213ENST00000514949 PHLPP2Q6ZVD8 1323 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 GYG1P46976 350 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 AKAP17AQ02040 695 aaKnown RBP20.03■□□□□ 0.8
SNX2-213ENST00000514949 TROAPQ12815 778 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 SLC10A5Q5PT55 438 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 TMED8Q6PL24 325 aaPredicted RBP20.03■□□□□ 0.8
SNX2-213ENST00000514949 CCDC82Q8N4S0 544 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 ABCF2Q9UG63 623 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 TRIM75PA6NK02 468 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 ZSCAN20P17040 1043 aaPredicted RBP20.03■□□□□ 0.8
SNX2-213ENST00000514949 CAVIN4Q5BKX8 364 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 TMEM139Q8IV31 216 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 ZNF397Q8NF99 534 aaPredicted RBP20.03■□□□□ 0.8
SNX2-213ENST00000514949 CSRNP2Q9H175 543 aa20.03■□□□□ 0.8
SNX2-213ENST00000514949 DDX41Q9UJV9 622 aaKnown RBP20.03■□□□□ 0.8
SNX2-213ENST00000514949 DDAH1O94760 285 aa20.02■□□□□ 0.8
SNX2-213ENST00000514949 CBX1P83916 185 aa20.02■□□□□ 0.8
SNX2-213ENST00000514949 SH3RF1Q7Z6J0 888 aa20.02■□□□□ 0.8
SNX2-213ENST00000514949 CATIPQ7Z7H3 387 aa20.02■□□□□ 0.8
SNX2-213ENST00000514949 FERMT2Q96AC1 680 aa20.02■□□□□ 0.8
SNX2-213ENST00000514949 CCDC34Q96HJ3 373 aa20.02■□□□□ 0.8
SNX2-213ENST00000514949 FAM84BQ96KN1 310 aaPredicted RBP20.02■□□□□ 0.8
SNX2-213ENST00000514949 MINPP1Q9UNW1 487 aa20.02■□□□□ 0.8
SNX2-213ENST00000514949 TMEM232C9JQI7 657 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 ARHGAP6O43182 974 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 PRR29P0C7W0 189 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 KRT2P35908 639 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 FMR1Q06787 632 aaKnown RBP eCLIP20.02■□□□□ 0.79
SNX2-213ENST00000514949 UTP14CQ5TAP6 766 aaKnown RBP20.02■□□□□ 0.79
SNX2-213ENST00000514949 BARGINQ6ZT62 677 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 FBXO33Q7Z6M2 555 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 IQCA1Q86XH1 822 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 NUTM2AQ8IVF1 878 aaPredicted RBP20.02■□□□□ 0.79
SNX2-213ENST00000514949 ZNF384Q8TF68 577 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 TNFRSF25Q93038 417 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 TAOK2Q9UL54 1235 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 NFE2L3Q9Y4A8 694 aa20.02■□□□□ 0.79
SNX2-213ENST00000514949 ORC4O43929 436 aa20.01■□□□□ 0.79
SNX2-213ENST00000514949 ERFEQ4G0M1 354 aa20.01■□□□□ 0.79
SNX2-213ENST00000514949 IFIT1BQ5T764 474 aaKnown RBP20.01■□□□□ 0.79
SNX2-213ENST00000514949 TRIM65Q6PJ69 517 aa20.01■□□□□ 0.79
SNX2-213ENST00000514949 SYT10Q6XYQ8 523 aa20.01■□□□□ 0.79
SNX2-213ENST00000514949 IQSEC3Q9UPP2 1182 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms