RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 IFIT1BQ5T764 474 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 IQCA1Q86XH1 822 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 SMARCE1Q969G3 411 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 CCDC34Q96HJ3 373 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 BRIP1Q9BX63 1249 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 SERTAD1Q9UHV2 236 aa20.55■□□□□ 0.88
CCHCR1-228ENST00000509552 PCP11498 1178 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 MLKLQ8NB16 471 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 OXER1Q8TDS5 423 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 DPF2Q92785 391 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 RBM28Q9NW13 759 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 MAN1B1Q9UKM7 699 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 TOP1P11387 765 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 NT5DC1Q5TFE4 455 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 VSTM4Q8IW00 320 aa20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 ENAHQ8N8S7 591 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 CICQ96RK0 1608 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-228ENST00000509552 CALM1P0DP23 149 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 CALM2P0DP24 149 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 CALM3P0DP25 149 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 BMP6P22004 513 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 SMAP1Q8IYB5 467 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 TRIML1Q8N9V2 468 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 GTF2E1P29083 439 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 KRT2P35908 639 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 DYNLL1P63167 89 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 PDE4BQ07343 736 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 ERO1AQ96HE7 468 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 MINPP1Q9UNW1 487 aa20.53■□□□□ 0.88
CCHCR1-228ENST00000509552 PRPF3O43395 683 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-228ENST00000509552 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
CCHCR1-228ENST00000509552 SARSP49591 514 aaKnown RBP20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 FEZ1Q99689 392 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 ZMYND15Q9H091 742 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 CSRNP2Q9H175 543 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 VPS54Q9P1Q0 977 aa20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 ZNF215Q9UL58 517 aaPredicted RBP20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 MORC2Q9Y6X9 1032 aaPredicted RBP20.52■□□□□ 0.87
CCHCR1-228ENST00000509552 COL1A1P02452 1464 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 SEMA3EO15041 775 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 SLU7O95391 586 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 PRR29P0C7W0 189 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 CDK11BP21127 795 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 CBX1P83916 185 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 MORC3Q14149 939 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 PDILTQ8N807 584 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 FAM84BQ96KN1 310 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 PHF20Q9BVI0 1012 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 DNAJC5Q9H3Z4 198 aa20.51■□□□□ 0.87
CCHCR1-228ENST00000509552 BMP15O95972 392 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 NAA30Q147X3 362 aaPredicted RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 PKN1Q16512 942 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 C3orf67Q6ZVT6 689 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 ENOX1Q8TC92 643 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 SPATA31A5Q5VU36 1347 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 SPATA31A7Q8IWB4 1347 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 DUOX1Q9NRD9 1551 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 COL4A1P02462 1669 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 ACTN4O43707 911 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 HOMER1Q86YM7 354 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 AATFQ9NY61 560 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 V9GY48 417 aaPredicted RBP20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 MYH6P13533 1939 aa20.5■□□□□ 0.87
CCHCR1-228ENST00000509552 CACNA1SQ13698 1873 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 CYP2D7A0A087X1C5 515 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 PRDM1O75626 825 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 DDAH1O94760 285 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 FGRP09769 529 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 TMX1Q9H3N1 280 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 NRAPQ86VF7 1730 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 WTIPA6NIX2 430 aaPredicted RBP20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 TMEM232C9JQI7 657 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 SMIM22K7EJ46 135 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 FUT2Q10981 343 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 CTR9Q6PD62 1173 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 SYT10Q6XYQ8 523 aa20.49■□□□□ 0.87
CCHCR1-228ENST00000509552 KCNQ2O43526 872 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 BARGINQ6ZT62 677 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 USP17L12C9JPN9 530 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 USP17L21D6R901 530 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 PLEKHA8P1O95397 391 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 TROAPQ12815 778 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 FCHSD1Q86WN1 690 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 NUTM2AQ8IVF1 878 aaPredicted RBP20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 GRAMD1CQ8IYS0 662 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 CELF1Q92879 486 aaKnown RBP20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 FERMT2Q96AC1 680 aa20.48■□□□□ 0.87
CCHCR1-228ENST00000509552 USP49Q70CQ1 688 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 SPATA20Q8TB22 786 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 CRNKL1Q9BZJ0 848 aaKnown RBP20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 L2HGDHQ9H9P8 463 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 MYH2Q9UKX2 1941 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 A0A1B0GUL6 1792 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 hCG_1642624A0A1W2PR95 340 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 SPDYE4A6NLX3 237 aa20.47■□□□□ 0.87
CCHCR1-228ENST00000509552 ZSCAN12O43309 604 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 398.8 ms