RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 MYH8P13535 1937 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 PRDM1O75626 825 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 LETM1O95202 739 aaPredicted RBP28.66■■■□□ 2.18
DHFR-203ENST00000505337 FMNL1O95466 1100 aaPredicted RBP28.66■■■□□ 2.18
DHFR-203ENST00000505337 SLC3A2P08195 630 aaKnown RBP28.66■■■□□ 2.18
DHFR-203ENST00000505337 NASPP49321 788 aaPredicted RBP28.66■■■□□ 2.18
DHFR-203ENST00000505337 MFSD14BQ5SR56 506 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 BRAPQ7Z569 592 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 AIFM3Q96NN9 605 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 TMX4Q9H1E5 349 aaPredicted RBP28.66■■■□□ 2.18
DHFR-203ENST00000505337 GJB4Q9NTQ9 266 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 RCOR1Q9UKL0 485 aa28.66■■■□□ 2.18
DHFR-203ENST00000505337 GAKO14976 1311 aa28.65■■■□□ 2.18
DHFR-203ENST00000505337 KIF23Q02241 960 aaPredicted RBP28.65■■■□□ 2.18
DHFR-203ENST00000505337 IQCA1Q86XH1 822 aa28.65■■■□□ 2.18
DHFR-203ENST00000505337 NOL10Q9BSC4 688 aaKnown RBP28.65■■■□□ 2.18
DHFR-203ENST00000505337 MCM9Q9NXL9 1143 aa28.65■■■□□ 2.18
DHFR-203ENST00000505337 COL4A5P29400 1685 aa28.64■■■□□ 2.18
DHFR-203ENST00000505337 GPR75-ASB3A0A0A6YYF3 556 aa28.64■■■□□ 2.18
DHFR-203ENST00000505337 TPRNQ4KMQ1 711 aa28.64■■■□□ 2.18
DHFR-203ENST00000505337 C12orf60Q5U649 245 aa28.64■■■□□ 2.18
DHFR-203ENST00000505337 MPNDQ8N594 471 aa28.64■■■□□ 2.18
DHFR-203ENST00000505337 FAM163AQ96GL9 167 aaPredicted RBP28.64■■■□□ 2.18
DHFR-203ENST00000505337 FTOQ9C0B1 505 aaKnown RBP eCLIP28.64■■■□□ 2.189e-18■■■■■ 29.4
DHFR-203ENST00000505337 USP17L8P0C7I0 530 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 LIG1P18858 919 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 USP5P45974 858 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 NT5C2P49902 561 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 CCDC196A0A1B0GTZ2 297 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 KIF28PB7ZC32 967 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 BTDP43251 543 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 C1QTNF8P60827 252 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 PPP2R5BQ15173 497 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 NBPF11Q86T75 865 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 FANCBQ8NB91 859 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 TSPY26PQ9H489 355 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 RRAGCQ9HB90 399 aa28.63■■■□□ 2.17
DHFR-203ENST00000505337 SCN9AQ15858 1988 aa28.62■■■□□ 2.17
DHFR-203ENST00000505337 PDE4BQ07343 736 aa28.62■■■□□ 2.17
DHFR-203ENST00000505337 SSRP1Q08945 709 aaKnown RBP28.62■■■□□ 2.17
DHFR-203ENST00000505337 DPP8Q6V1X1 898 aaPredicted RBP28.62■■■□□ 2.17
DHFR-203ENST00000505337 SLC26A6Q9BXS9 759 aa28.62■■■□□ 2.17
DHFR-203ENST00000505337 IFIT1BQ5T764 474 aaKnown RBP28.61■■■□□ 2.17
DHFR-203ENST00000505337 KRT40Q6A162 431 aa28.61■■■□□ 2.17
DHFR-203ENST00000505337 DPY19L2Q6NUT2 758 aa28.61■■■□□ 2.17
DHFR-203ENST00000505337 GOLGA6L4A6NEF3 574 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 FZD9O00144 591 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 RTEL1Q9NZ71 1219 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 RIMBP2O15034 1052 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 MYSM1Q5VVJ2 828 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 SLF2Q8IX21 1173 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 WASF1Q92558 559 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 SUGT1Q9Y2Z0 365 aa28.6■■■□□ 2.17
DHFR-203ENST00000505337 PSME4Q14997 1843 aa28.59■■■□□ 2.17
DHFR-203ENST00000505337 POTECB2RU33 542 aa28.59■■■□□ 2.17
DHFR-203ENST00000505337 DDAH1O94760 285 aa28.59■■■□□ 2.17
DHFR-203ENST00000505337 DDNO94850 711 aaPredicted RBP28.59■■■□□ 2.17
DHFR-203ENST00000505337 PLCG2P16885 1265 aa28.59■■■□□ 2.17
DHFR-203ENST00000505337 CEBPZQ03701 1054 aaKnown RBP28.59■■■□□ 2.17
DHFR-203ENST00000505337 TGFBRAP1Q8WUH2 860 aa28.59■■■□□ 2.17
DHFR-203ENST00000505337 NUP133Q8WUM0 1156 aa28.59■■■□□ 2.17
DHFR-203ENST00000505337 ZNF541Q9H0D2 1346 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 UBE2Q2LH0YL09 131 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 RHBDL3P58872 404 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 GTF2IP78347 998 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 AOC3Q16853 763 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 TRIM22Q8IYM9 498 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 LARGE2Q8N3Y3 721 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 CRACR2BQ8N4Y2 399 aaPredicted RBP28.58■■■□□ 2.17
DHFR-203ENST00000505337 FUCA2Q9BTY2 467 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 ZC3H12CQ9C0D7 883 aaKnown RBP28.58■■■□□ 2.17
DHFR-203ENST00000505337 POLR3EQ9NVU0 708 aa28.58■■■□□ 2.17
DHFR-203ENST00000505337 TROAPQ12815 778 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 CATIPQ7Z7H3 387 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 SUPT20HQ8NEM7 779 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 BICD2Q8TD16 824 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 JDP2Q8WYK2 163 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 VPS33BQ9H267 617 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 DDX19AQ9NUU7 478 aaKnown RBP28.57■■■□□ 2.16
DHFR-203ENST00000505337 PPIP5K2O43314 1243 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 CALM1P0DP23 149 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 CALM2P0DP24 149 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 CALM3P0DP25 149 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 WDR90Q96KV7 1748 aa28.57■■■□□ 2.16
DHFR-203ENST00000505337 DEXIO95424 95 aa28.56■■■□□ 2.16
DHFR-203ENST00000505337 YEATS4O95619 227 aa28.56■■■□□ 2.16
DHFR-203ENST00000505337 POLR3DP05423 398 aaPredicted RBP28.56■■■□□ 2.16
DHFR-203ENST00000505337 GUCY1A2P33402 732 aa28.56■■■□□ 2.16
DHFR-203ENST00000505337 FAM47AQ5JRC9 791 aa28.56■■■□□ 2.16
DHFR-203ENST00000505337 AMOTL1Q8IY63 956 aa28.56■■■□□ 2.16
DHFR-203ENST00000505337 RNF26Q9BY78 433 aaPredicted RBP28.56■■■□□ 2.16
DHFR-203ENST00000505337 NUP62CLQ9H1M0 184 aa28.56■■■□□ 2.16
DHFR-203ENST00000505337 DACT1Q9NYF0 836 aa28.56■■■□□ 2.16
DHFR-203ENST00000505337 NMT2O60551 498 aa28.55■■■□□ 2.16
DHFR-203ENST00000505337 U2AF2P26368 475 aaKnown RBP eCLIP28.55■■■□□ 2.16
DHFR-203ENST00000505337 TRIM29Q14134 588 aa28.55■■■□□ 2.16
DHFR-203ENST00000505337 MAPKAPK5Q8IW41 473 aa28.55■■■□□ 2.16
DHFR-203ENST00000505337 TEX11Q8IYF3 940 aa28.55■■■□□ 2.16
DHFR-203ENST00000505337 RBM28Q9NW13 759 aaKnown RBP28.55■■■□□ 2.16
DHFR-203ENST00000505337 DAGLAQ9Y4D2 1042 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms