RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CIAO1O76071 339 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 GTF2A1P52655 376 aaPredicted RBP18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 GRM1Q13255 1194 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 PLS1Q14651 629 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 GSTA5Q7RTV2 222 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 CSGALNACT2Q8N6G5 542 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 HOOK2Q96ED9 719 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 MTUS1Q9ULD2 1270 aa18.08■□□□□ 0.48
HMGXB3-202ENST00000503427 LARGE2Q8N3Y3 721 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 TMEM110-MUSTN1A8MSY1 372 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 GABPB1Q06547 395 aaPredicted RBP18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 POSTNQ15063 836 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 ELF2Q15723 593 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 CCDC26Q8TAB7 109 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 SREK1Q8WXA9 508 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 DNAJC21Q5F1R6 531 aaKnown RBP18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 ADALQ6DHV7 355 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 CCDC24Q8N4L8 307 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 ATP6V0A2Q9Y487 856 aa18.07■□□□□ 0.48
HMGXB3-202ENST00000503427 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 EEF2P13639 858 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 RAPGEF1Q13905 1077 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 RNF17Q9BXT8 1623 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 ZNF500O60304 480 aaPredicted RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 CALCOCO2Q13137 446 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 ATP2B4P23634 1241 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 CCDC6Q16204 474 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 JAKMIP2Q96AA8 810 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 CEP63Q96MT8 703 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 DCAF17Q5H9S7 520 aaPredicted RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 KRT25Q7Z3Z0 450 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 NAP1L3Q99457 506 aaPredicted RBP18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 OSBPL3Q9H4L5 887 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 ASAP1Q9ULH1 1129 aa18.06■□□□□ 0.48
HMGXB3-202ENST00000503427 PPARAQ07869 468 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 TTC31Q49AM3 519 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 TLDC2A0PJX2 215 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 EPB41P11171 864 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 PDE6AP16499 860 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 C8orf74Q6P047 294 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 ZSWIM6Q9HCJ5 1215 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 A6NNZ2 444 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 TUBB8Q3ZCM7 444 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 CCDC50Q8IVM0 306 aa18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 TRPC5Q9UL62 973 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-202ENST00000503427 PLCB3Q01970 1234 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 PHKBQ93100 1093 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 PICK1Q9NRD5 415 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 STK24Q9Y6E0 443 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 KRT9P35527 623 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 LRRC24Q50LG9 513 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 MYSM1Q5VVJ2 828 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 HAUS3Q68CZ6 603 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 MAPKAPK5Q8IW41 473 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 TCHPQ9BT92 498 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 FRMD4BQ9Y2L6 1034 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 PDE8BO95263 885 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 FERP16591 822 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 SAMD15Q9P1V8 674 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 MTMR6Q9Y217 621 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 SLC1A4P43007 532 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 NONOQ15233 471 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 PPP1R7Q15435 360 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 PPM1EQ8WY54 764 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 SECISBP2LQ93073 1101 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 CCDC114Q96M63 670 aa18.04■□□□□ 0.48
HMGXB3-202ENST00000503427 RGS12O14924 1447 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 GJC1P36383 396 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 EIF6P56537 245 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 TFAP4Q01664 338 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 SEL1L2Q5TEA6 688 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 TGFBRAP1Q8WUH2 860 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 MAPK8IP1Q9UQF2 711 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 GJA3Q9Y6H8 435 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 SPHKAPQ2M3C7 1700 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 KIAA1468Q9P260 1216 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 MFSD14BQ5SR56 506 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 XPO4Q9C0E2 1151 aaKnown RBP18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 ATG3Q9NT62 314 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 UBLCP1Q8WVY7 318 aaPredicted RBP18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 NOX5Q96PH1 765 aa18.03■□□□□ 0.48
HMGXB3-202ENST00000503427 UBE3CQ15386 1083 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 HSPD1P10809 573 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 IFNL3Q8IZI9 196 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 RASSF4Q9H2L5 321 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 CDC42BPGQ6DT37 1551 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 CETN3O15182 167 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 CCNT1O60563 726 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 ADCY7P51828 1080 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms