RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 HERVK_113P62684 666 aa18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 G3BP1Q13283 466 aaKnown RBP eCLIP18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 Q3C1V9 767 aa18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 MAP3K21Q5TCX8 1036 aa18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 MAPKAPK5Q8IW41 473 aa18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 TGFBRAP1Q8WUH2 860 aa18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 NOL10Q9BSC4 688 aaKnown RBP18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 DHX36Q9H2U1 1008 aaKnown RBP18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 TMOD4Q9NZQ9 345 aa18.03■□□□□ 0.48
SEC61A1-207ENST00000498837 PFASO15067 1338 aa18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 GDF11O95390 407 aa18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 MAGEA10P43363 369 aaPredicted RBP18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 NAA16Q6N069 864 aaPredicted RBP18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 ADGRA1Q86SQ6 560 aa18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 GPRC5AQ8NFJ5 357 aa18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 NUDT12Q9BQG2 462 aa18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 RBPJLQ9UBG7 517 aa18.02■□□□□ 0.48
SEC61A1-207ENST00000498837 C19orf81C9J6K1 198 aa18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 BAG3O95817 575 aa18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 GNAI2P04899 355 aa18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 PPP4CP60510 307 aa18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 CACNB2Q08289 660 aaPredicted RBP18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 Q7L0L9 218 aa18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 METTL16Q86W50 562 aaKnown RBP18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 PALD1Q9ULE6 856 aa18.01■□□□□ 0.47
SEC61A1-207ENST00000498837 FLT1P17948 1338 aa18■□□□□ 0.47
SEC61A1-207ENST00000498837 USP17L10C9JJH3 530 aa18■□□□□ 0.47
SEC61A1-207ENST00000498837 XRCC5P13010 732 aaKnown RBP18■□□□□ 0.47
SEC61A1-207ENST00000498837 CCL14Q16627 93 aa18■□□□□ 0.47
SEC61A1-207ENST00000498837 FOXP4Q8IVH2 680 aaPredicted RBP18■□□□□ 0.47
SEC61A1-207ENST00000498837 CRACR2BQ8N4Y2 399 aaPredicted RBP18■□□□□ 0.47
SEC61A1-207ENST00000498837 DEFB123Q8N688 67 aa18■□□□□ 0.47
SEC61A1-207ENST00000498837 USP6NLQ92738 828 aa18■□□□□ 0.47
SEC61A1-207ENST00000498837 PORCNQ9H237 461 aa18■□□□□ 0.47
SEC61A1-207ENST00000498837 CYP2E1P05181 493 aaPredicted RBP17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 TRIM27P14373 513 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 PLCG2P16885 1265 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 CCND3P30281 292 aaPredicted RBP17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 ERVK-9P63128 1117 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 ERVK-24P63145 666 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 TTC39AQ5SRH9 613 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 SOCS4Q8WXH5 440 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 DBNDD2Q9BQY9 259 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 PAGR1Q9BTK6 254 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 SAP30BPQ9UHR5 308 aaKnown RBP17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 ZBTB21Q9ULJ3 1066 aa17.99■□□□□ 0.47
SEC61A1-207ENST00000498837 MAPK4P31152 587 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 DYNLL1P63167 89 aaKnown RBP17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 PDE3AQ14432 1141 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 LRIT3Q3SXY7 679 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 GPR153Q6NV75 609 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 GPR142Q7Z601 462 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 TDHQ8IZJ6 230 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 CLUAP1Q96AJ1 413 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 TRIM34Q9BYJ4 488 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 EMILIN3Q9NT22 766 aa17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 LAMA2P24043 3122 aaKnown RBP17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 ZNFX1Q9P2E3 1918 aaKnown RBP17.98■□□□□ 0.47
SEC61A1-207ENST00000498837 BCAR3O75815 825 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 COL6A1P12109 1028 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 ZKSCAN1P17029 563 aaPredicted RBP17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 TNNI3KQ59H18 835 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 CCDC158Q5M9N0 1113 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 MORN1Q5T089 497 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 LHX8Q68G74 356 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 TRMT44Q8IYL2 757 aaKnown RBP17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 FRAT1Q92837 279 aaPredicted RBP17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 UBE2OQ9C0C9 1292 aaKnown RBP17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 GPR108Q9NPR9 543 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 PIH1D3Q9NQM4 214 aaKnown RBP17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 GINM1Q9NU53 330 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 FPGT-TNNI3KV9GXZ4 949 aa17.97■□□□□ 0.47
SEC61A1-207ENST00000498837 RGS2P41220 211 aa17.96■□□□□ 0.47
SEC61A1-207ENST00000498837 ZAP70P43403 619 aa17.96■□□□□ 0.47
SEC61A1-207ENST00000498837 LRRC26Q2I0M4 334 aa17.96■□□□□ 0.47
SEC61A1-207ENST00000498837 USP17L2Q6R6M4 530 aa17.96■□□□□ 0.47
SEC61A1-207ENST00000498837 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.47
SEC61A1-207ENST00000498837 PLEKHH3Q7Z736 793 aa17.96■□□□□ 0.47
SEC61A1-207ENST00000498837 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
SEC61A1-207ENST00000498837 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 GH2P01242 217 aa17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 POLA2Q14181 598 aa17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 ZYXQ15942 572 aaKnown RBP17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 MTMR10Q9NXD2 777 aa17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 NDUFB9Q9Y6M9 179 aa17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 MYH8P13535 1937 aa17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 RLFQ13129 1914 aa17.95■□□□□ 0.46
SEC61A1-207ENST00000498837 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
SEC61A1-207ENST00000498837 CNMDO75829 334 aa17.94■□□□□ 0.46
SEC61A1-207ENST00000498837 HLA-DOAP06340 250 aa17.94■□□□□ 0.46
SEC61A1-207ENST00000498837 MDM2Q00987 491 aaPredicted RBP17.94■□□□□ 0.46
SEC61A1-207ENST00000498837 GTF3C2Q8WUA4 911 aaPredicted RBP17.94■□□□□ 0.46
SEC61A1-207ENST00000498837 APBA2Q99767 749 aa17.94■□□□□ 0.46
SEC61A1-207ENST00000498837 UNC80Q8N2C7 3258 aa17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 CYP7A1P22680 504 aa17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 MAP2K5Q13163 448 aa17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 OS9Q13438 667 aaPredicted RBP17.93■□□□□ 0.46
SEC61A1-207ENST00000498837 TMEM57Q8N5G2 664 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms