RNA–Protein interactions for RNA: ENST00000497952.5

HDAC10-220, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-220ENST00000497952 ASNSP08243 561 aa13.19□□□□□ -0.3
HDAC10-220ENST00000497952 USP5P45974 858 aa13.19□□□□□ -0.3
HDAC10-220ENST00000497952 GJA8P48165 433 aa13.19□□□□□ -0.3
HDAC10-220ENST00000497952 IRX3P78415 501 aaPredicted RBP13.19□□□□□ -0.3
HDAC10-220ENST00000497952 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
HDAC10-220ENST00000497952 ERC1Q8IUD2 1116 aa13.19□□□□□ -0.3
HDAC10-220ENST00000497952 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
HDAC10-220ENST00000497952 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
HDAC10-220ENST00000497952 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
HDAC10-220ENST00000497952 GCLCP48506 637 aaPredicted RBP13.18□□□□□ -0.3
HDAC10-220ENST00000497952 BACE1P56817 501 aa13.18□□□□□ -0.3
HDAC10-220ENST00000497952 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
HDAC10-220ENST00000497952 WDR18Q9BV38 432 aa13.18□□□□□ -0.3
HDAC10-220ENST00000497952 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
HDAC10-220ENST00000497952 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
HDAC10-220ENST00000497952 H0YGN5 161 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 IGSF3O75054 1194 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
HDAC10-220ENST00000497952 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 IRF5Q13568 498 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 HSP90AB4PQ58FF6 505 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 DPF3Q92784 378 aa13.17□□□□□ -0.3
HDAC10-220ENST00000497952 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
HDAC10-220ENST00000497952 PEX10O60683 326 aa13.16□□□□□ -0.3
HDAC10-220ENST00000497952 MS4A1P11836 297 aa13.16□□□□□ -0.3
HDAC10-220ENST00000497952 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
HDAC10-220ENST00000497952 METTL16Q86W50 562 aaKnown RBP13.16□□□□□ -0.3
HDAC10-220ENST00000497952 DEFB118Q96PH6 123 aa13.16□□□□□ -0.3
HDAC10-220ENST00000497952 COLQQ9Y215 455 aaPredicted RBP13.16□□□□□ -0.3
HDAC10-220ENST00000497952 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
HDAC10-220ENST00000497952 C19orf81C9J6K1 198 aa13.15□□□□□ -0.3
HDAC10-220ENST00000497952 SGPL1O95470 568 aa13.15□□□□□ -0.3
HDAC10-220ENST00000497952 GH2P01242 217 aa13.15□□□□□ -0.3
HDAC10-220ENST00000497952 HERVK_113P62684 666 aa13.15□□□□□ -0.3
HDAC10-220ENST00000497952 CERS3Q8IU89 383 aa13.15□□□□□ -0.3
HDAC10-220ENST00000497952 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
HDAC10-220ENST00000497952 DNAJC2Q99543 621 aaKnown RBP13.15□□□□□ -0.3
HDAC10-220ENST00000497952 P2RX7Q99572 595 aaKnown RBP13.15□□□□□ -0.3
HDAC10-220ENST00000497952 HTATIP2Q9BUP3 242 aa13.15□□□□□ -0.3
HDAC10-220ENST00000497952 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
HDAC10-220ENST00000497952 MAGEB6P1A0A0J9YX57 407 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 HMMRO75330 724 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 TFRCP02786 760 aaKnown RBP13.14□□□□□ -0.31
HDAC10-220ENST00000497952 IFIT2P09913 472 aaKnown RBP13.14□□□□□ -0.31
HDAC10-220ENST00000497952 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
HDAC10-220ENST00000497952 TTF1Q15361 905 aaPredicted RBP13.14□□□□□ -0.31
HDAC10-220ENST00000497952 USP17L2Q6R6M4 530 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 FEZ1Q99689 392 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 PAGR1Q9BTK6 254 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 TXNRD2Q9NNW7 524 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 MORF4L1Q9UBU8 362 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
HDAC10-220ENST00000497952 CEP290O15078 2479 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 GOLIM4O00461 696 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 HMGCRP04035 888 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
HDAC10-220ENST00000497952 PDE6AP16499 860 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 CYP2B6P20813 491 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 TRIM32Q13049 653 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
HDAC10-220ENST00000497952 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
HDAC10-220ENST00000497952 RIOK1Q9BRS2 568 aaKnown RBP13.13□□□□□ -0.31
HDAC10-220ENST00000497952 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.13□□□□□ -0.311e-6■□□□□ 8.2
HDAC10-220ENST00000497952 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 GJD2Q9UKL4 321 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 ZNF532Q9HCE3 1301 aa13.13□□□□□ -0.31
HDAC10-220ENST00000497952 FXR1P51114 621 aaKnown RBP eCLIP13.12□□□□□ -0.31
HDAC10-220ENST00000497952 PLCD1P51178 756 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 ABCB5Q2M3G0 1257 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 CERKLQ49MI3 558 aaPredicted RBP13.12□□□□□ -0.31
HDAC10-220ENST00000497952 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 TATDN1Q6P1N9 297 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 CCAR1Q8IX12 1150 aaKnown RBP13.12□□□□□ -0.31
HDAC10-220ENST00000497952 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 GPRC5AQ8NFJ5 357 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 TRIB2Q92519 343 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 CRNKL1Q9BZJ0 848 aaKnown RBP13.12□□□□□ -0.31
HDAC10-220ENST00000497952 EHD4Q9H223 541 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 CABP5Q9NP86 173 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
HDAC10-220ENST00000497952 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
HDAC10-220ENST00000497952 SHMT1P34896 483 aa13.11□□□□□ -0.31
HDAC10-220ENST00000497952 ERVK-9P63128 1117 aa13.11□□□□□ -0.31
HDAC10-220ENST00000497952 ERVK-24P63145 666 aa13.11□□□□□ -0.31
HDAC10-220ENST00000497952 EVX2Q03828 476 aa13.11□□□□□ -0.31
HDAC10-220ENST00000497952 PDE3AQ14432 1141 aa13.11□□□□□ -0.31
HDAC10-220ENST00000497952 Q3C1V9 767 aa13.11□□□□□ -0.31
HDAC10-220ENST00000497952 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
HDAC10-220ENST00000497952 DIS3LQ8TF46 1054 aaKnown RBP13.11□□□□□ -0.31
HDAC10-220ENST00000497952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms