RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 TBC1D32Q96NH3 1257 aa12.79□□□□□ -0.36
MACF1-225ENST00000497807 SPO11Q9Y5K1 396 aa12.79□□□□□ -0.36
MACF1-225ENST00000497807 GLI3P10071 1580 aa12.79□□□□□ -0.36
MACF1-225ENST00000497807 ERLIN2O94905 339 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 LRRC23Q53EV4 343 aaPredicted RBP12.78□□□□□ -0.36
MACF1-225ENST00000497807 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 ZNF510Q9Y2H8 683 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 HIP1RO75146 1068 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 ZMYND10O75800 440 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 CWC27Q6UX04 472 aaKnown RBP12.78□□□□□ -0.36
MACF1-225ENST00000497807 MPRIPQ6WCQ1 1025 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
MACF1-225ENST00000497807 BATF3Q9NR55 127 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 MAFFQ9ULX9 164 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 SLC30A1Q9Y6M5 507 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
MACF1-225ENST00000497807 GOLGA6L10A6NI86 522 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.36
MACF1-225ENST00000497807 SH3BGRP55822 239 aaPredicted RBP12.77□□□□□ -0.36
MACF1-225ENST00000497807 GNPTABQ3T906 1256 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 CWF19L1Q69YN2 538 aaKnown RBP12.77□□□□□ -0.36
MACF1-225ENST00000497807 ISM2Q6H9L7 571 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 DRC7Q8IY82 874 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 SAMD14Q8IZD0 417 aaPredicted RBP12.77□□□□□ -0.36
MACF1-225ENST00000497807 KAT2BQ92831 832 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 GTF3C6Q969F1 213 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 CEP63Q96MT8 703 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 GSDMAQ96QA5 445 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 CENPOQ9BU64 300 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.36
MACF1-225ENST00000497807 TMEM221A6NGB7 291 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 FAM25EA8MYX2 175 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.77□□□□□ -0.37
MACF1-225ENST00000497807 SEMA3EO15041 775 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 PNMA6AP0CW24 399 aaPredicted RBP12.77□□□□□ -0.37
MACF1-225ENST00000497807 PHKG2P15735 406 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 MAB21L3Q8N8X9 362 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.37
MACF1-225ENST00000497807 RBM41Q96IZ5 413 aaKnown RBP12.77□□□□□ -0.37
MACF1-225ENST00000497807 RUFY1Q96T51 708 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 OSBPL10Q9BXB5 764 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
MACF1-225ENST00000497807 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.77□□□□□ -0.37
MACF1-225ENST00000497807 H2AFXP16104 143 aaPredicted RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 CSE1LP55060 971 aaKnown RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 TRIM29Q14134 588 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 IQCA1Q86XH1 822 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 CCDC68Q9H2F9 335 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 GNAT3A8MTJ3 354 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 NPHP1O15259 732 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 FGFR1OPO95684 399 aaKnown RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 NEK10Q6ZWH5 1172 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 TMC6Q7Z403 805 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 SLC7A5P1Q8MH63 180 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 CCDC112Q8NEF3 446 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 BICD2Q8TD16 824 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
MACF1-225ENST00000497807 DTNBP1Q96EV8 351 aa12.76□□□□□ -0.37
MACF1-225ENST00000497807 ARHGEF6Q15052 776 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 CHCHD4Q8N4Q1 142 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 OSBPL9Q96SU4 736 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 PARD6BQ9BYG5 372 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 TUBA8Q9NY65 449 aaPredicted RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 M0R2C6 588 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 RPSAP08865 295 aaKnown RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 TMEM62Q0P6H9 643 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 MCM10Q7L590 875 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 CUL5Q93034 780 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 ZKSCAN4Q969J2 545 aaPredicted RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 TBKBP1A7MCY6 615 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 CNGA3Q16281 694 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 CEP57L1Q8IYX8 460 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
MACF1-225ENST00000497807 IWS1Q96ST2 819 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 ITGB1BP2Q9UKP3 347 aa12.75□□□□□ -0.37
MACF1-225ENST00000497807 ROR2Q01974 943 aaKnown RBP12.74□□□□□ -0.37
MACF1-225ENST00000497807 BTG3Q14201 252 aaPredicted RBP12.74□□□□□ -0.37
MACF1-225ENST00000497807 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
MACF1-225ENST00000497807 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms